5y92 - Revision history

OCA at 06:52, 4 April 2018

OCA — Wed, 04 Apr 2018 06:52:39 GMT

←Older revision		Revision as of 06:52, 4 April 2018
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	<StructureSection load='5y92' size='340' side='right' caption='[[5y92]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='5y92' size='340' side='right' caption='[[5y92]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5y92]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y92 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y92 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5y92]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y92 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y92 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ANX2, At5g28680, F4I4.60 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y92 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y92 OCA], [http://pdbe.org/5y92 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y92 RCSB], [http://www.ebi.ac.uk/pdbsum/5y92 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y92 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y92 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y92 OCA], [http://pdbe.org/5y92 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y92 RCSB], [http://www.ebi.ac.uk/pdbsum/5y92 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y92 ProSAT]</span></td></tr>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Arath]]
	[[Category: Non-specific serine/threonine protein kinase]]		[[Category: Non-specific serine/threonine protein kinase]]
	[[Category: Du, S]]		[[Category: Du, S]]

OCA at 06:27, 28 February 2018

OCA — Wed, 28 Feb 2018 06:27:57 GMT

←Older revision		Revision as of 06:27, 28 February 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 5y92 is ~~ON HOLD~~ ~~until Paper~~ Publication	+	==Crystal structure of ANXUR2 extracellular domain from Arabidopsis thaliana==
		+	<StructureSection load='5y92' size='340' side='right' caption='[[5y92]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5y92]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y92 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y92 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y92 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y92 OCA], [http://pdbe.org/5y92 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y92 RCSB], [http://www.ebi.ac.uk/pdbsum/5y92 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y92 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/ANX2_ARATH ANX2_ARATH]] Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell.<ref>PMID:19646876</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Catharanthus roseus Receptor-Like Kinase 1-like (CrRLK1L) proteins contain two tandem malectin-like modules in their extracellular domains (ECDs) and function in diverse signaling pathways in plants. Malectin is a carbohydrate-binding protein in animals and recognizes a number of diglucosides; however, it remains unclear how the two malectin-like domains in the CrRLK1L proteins sense the ligand molecule. In this study, we reveal the crystal structures of the ECDs of ANXUR1 and ANXUR2, two CrRLK1L members in Arabidopsis thaliana that have critical functions in controlling pollen tube rupture during the fertilization process. We show that the two malectin-like domains in these proteins pack together to form a rigid architecture. Unlike animal malectin, these malectin-like domains lack residues involved in binding to the diglucosides, suggesting that they have a distinct ligand-binding mechanism. A cleft is observed between the two malectin-like domains, which might function as a potential ligand-binding pocket. This article is protected by copyright. All rights reserved.

-	~~Authors: Du~~, S., ~~Xiao~~, J.Y.	+	Crystal structures of the extracellular domains of the CrRLK1L receptor-like kinases ANXUR1 and ANXUR2.,Du S, Qu LJ, Xiao J Protein Sci. 2018 Feb 1. doi: 10.1002/pro.3381. PMID:29388293<ref>PMID:29388293</ref>

-	~~Description: Crystal structure~~ of ~~ANXUR2 extracellular domain from Arabidopsis thaliana~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased Structures~~]]	+	</div>
		+	<div class="pdbe-citations 5y92" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Non-specific serine/threonine protein kinase]]
	[[Category: Du, S]]		[[Category: Du, S]]
-	[[Category: Xiao, J.Y]]	+	[[Category: Xiao, J Y]]
		+	[[Category: Receptor-like kinase]]
		+	[[Category: Transferase]]

OCA: Protected "5y92" [edit=sysop:move=sysop]

OCA — Wed, 27 Sep 2017 16:17:05 GMT

Protected "5y92" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:17, 27 September 2017

OCA: New page: '''Unreleased structure''' The entry 5y92 is ON HOLD until Paper Publication Authors: Du, S., Xiao, J.Y. Description: Crystal structure of ANXUR2 extracellular domain from Arabidopsis ...

OCA — Wed, 27 Sep 2017 16:17:04 GMT

New page: '''Unreleased structure''' The entry 5y92 is ON HOLD until Paper Publication Authors: Du, S., Xiao, J.Y. Description: Crystal structure of ANXUR2 extracellular domain from Arabidopsis ...

New page

'''Unreleased structure'''

The entry 5y92 is ON HOLD until Paper Publication

Authors: Du, S., Xiao, J.Y.

Description: Crystal structure of ANXUR2 extracellular domain from Arabidopsis thaliana
[[Category: Unreleased Structures]]
[[Category: Du, S]]
[[Category: Xiao, J.Y]]