5zca - Revision history

OCA at 08:51, 22 November 2023

OCA — Wed, 22 Nov 2023 08:51:27 GMT

←Older revision		Revision as of 08:51, 22 November 2023
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	<StructureSection load='5zca' size='340' side='right'caption='[[5zca]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='5zca' size='340' side='right'caption='[[5zca]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5zca]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacteriophage_lambda Bacteriophage lambda~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZCA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5ZCA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5zca]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12] and [https://en.wikipedia.org/wiki/Escherichia_virus_Lambda Escherichia virus Lambda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZCA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZCA FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>~~, ~~<scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.801Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~malE, b4034, JW3994 ([http~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id~~=~~10710 Bacteriophage lambda])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900001:alpha-maltose'>PRD_900001</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5zca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zca OCA], [~~http~~://pdbe.org/5zca PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5zca RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5zca PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5zca ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zca OCA], [https://pdbe.org/5zca PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zca RCSB], [https://www.ebi.ac.uk/pdbsum/5zca PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zca ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/RPC1_LAMBD RPC1_LAMBD]] Repressor protein CI allows phage lambda to reside inactively in the chromosome of its host bacterium. This lysogenic state is maintained by binding of regulatory protein CI to the OR and OL operators, preventing transcription of proteins necessary for lytic development.	+	[https://www.uniprot.org/uniprot/MALE_ECOLI MALE_ECOLI] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.[https://www.uniprot.org/uniprot/RPC1_LAMBD RPC1_LAMBD] Repressor protein CI allows phage lambda to reside inactively in the chromosome of its host bacterium. This lysogenic state is maintained by binding of regulatory protein CI to the OR and OL operators, preventing transcription of proteins necessary for lytic development.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacteriophage lambda~~]]	+	[[Category: Escherichia coli K-12]]
		+	[[Category: Escherichia virus Lambda]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Hanazono, Y]]	+	[[Category: Hanazono Y]]
-	[[Category: Miki, K]]	+	[[Category: Miki K]]
-	[[Category: Takeda, K]]	+	[[Category: Takeda K]]
-	~~[[Category: Dna binding protein]]~~	+
-	~~[[Category: Lambda repressor]]~~	+
-	~~[[Category: Maltose-binding protein]]~~	+
-	~~[[Category: Sugar binding protein~~]]	+

OCA at 21:18, 28 October 2020

OCA — Wed, 28 Oct 2020 21:18:12 GMT

←Older revision		Revision as of 21:18, 28 October 2020
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	==Crystal structure of lambda repressor (1-20) fused with maltose-binding protein==		==Crystal structure of lambda repressor (1-20) fused with maltose-binding protein==
-	<StructureSection load='5zca' size='340' side='right' caption='[[5zca]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='5zca' size='340' side='right'caption='[[5zca]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5zca]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZCA OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca.weizmann.ac~~.~~il/oca-docs~~/fgij/fg.htm?mol=5ZCA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5zca]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteriophage_lambda Bacteriophage lambda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZCA OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5ZCA FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=~~MAL~~:~~MALTOSE~~'>~~MAL~~</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5zca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zca OCA], [http://pdbe.org/5zca PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zca RCSB], [http://www.ebi.ac.uk/pdbsum/5zca PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zca ProSAT]</span></td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">malE, b4034, JW3994 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10710 Bacteriophage lambda])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5zca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zca OCA], [http://pdbe.org/5zca PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zca RCSB], [http://www.ebi.ac.uk/pdbsum/5zca PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zca ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacteriophage lambda]]
		+	[[Category: Large Structures]]
	[[Category: Hanazono, Y]]		[[Category: Hanazono, Y]]
	[[Category: Miki, K]]		[[Category: Miki, K]]

OCA at 16:08, 15 August 2018

OCA — Wed, 15 Aug 2018 16:08:55 GMT

←Older revision		Revision as of 16:08, 15 August 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 5zca is ON HOLD until Paper Publication~~	+	==Crystal structure of lambda repressor (1-20) fused with maltose-binding protein==
-		+	<StructureSection load='5zca' size='340' side='right' caption='[[5zca]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~Authors: Hanazono, Y., Takeda, K., Miki, K.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5zca]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZCA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ZCA FirstGlance]. <br>
-	~~Description:~~ Crystal structure of lambda repressor (1-20) fused with maltose-binding protein	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=MAL:MALTOSE'>MAL</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5zca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zca OCA], [http://pdbe.org/5zca PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zca RCSB], [http://www.ebi.ac.uk/pdbsum/5zca PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zca ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Takeda~~, K]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/RPC1_LAMBD RPC1_LAMBD]] Repressor protein CI allows phage lambda to reside inactively in the chromosome of its host bacterium. This lysogenic state is maintained by binding of regulatory protein CI to the OR and OL operators, preventing transcription of proteins necessary for lytic development.
		+	__TOC__
		+	</StructureSection>
	[[Category: Hanazono, Y]]		[[Category: Hanazono, Y]]
	[[Category: Miki, K]]		[[Category: Miki, K]]
		+	[[Category: Takeda, K]]
		+	[[Category: Dna binding protein]]
		+	[[Category: Lambda repressor]]
		+	[[Category: Maltose-binding protein]]
		+	[[Category: Sugar binding protein]]

OCA: Protected "5zca" [edit=sysop:move=sysop]

OCA — Thu, 08 Mar 2018 03:35:51 GMT

Protected "5zca" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:35, 8 March 2018

OCA: New page: '''Unreleased structure''' The entry 5zca is ON HOLD until Paper Publication Authors: Hanazono, Y., Takeda, K., Miki, K. Description: Crystal structure of lambda repressor (1-20) fused...

OCA — Thu, 08 Mar 2018 03:35:50 GMT

New page: '''Unreleased structure''' The entry 5zca is ON HOLD until Paper Publication Authors: Hanazono, Y., Takeda, K., Miki, K. Description: Crystal structure of lambda repressor (1-20) fused...

New page

'''Unreleased structure'''

The entry 5zca is ON HOLD until Paper Publication

Authors: Hanazono, Y., Takeda, K., Miki, K.

Description: Crystal structure of lambda repressor (1-20) fused with maltose-binding protein
[[Category: Unreleased Structures]]
[[Category: Takeda, K]]
[[Category: Hanazono, Y]]
[[Category: Miki, K]]