5zeo - Revision history

OCA at 08:52, 22 November 2023

OCA — Wed, 22 Nov 2023 08:52:34 GMT

←Older revision		Revision as of 08:52, 22 November 2023
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	<StructureSection load='5zeo' size='340' side='right'caption='[[5zeo]], [[Resolution\|resolution]] 1.77Å' scene=''>		<StructureSection load='5zeo' size='340' side='right'caption='[[5zeo]], [[Resolution\|resolution]] 1.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5zeo]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZEO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5ZEO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5zeo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZEO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZEO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.77Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5zeo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zeo OCA], [~~http~~://pdbe.org/5zeo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5zeo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5zeo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5zeo ProSAT]</span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zeo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zeo OCA], [https://pdbe.org/5zeo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zeo RCSB], [https://www.ebi.ac.uk/pdbsum/5zeo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zeo ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~MYG_PHYCD MYG_PHYCD]~~] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.	+	[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Yuan, H~~]]	+	[[Category: Physeter catodon]]
-	[[Category: ~~Myoglobin]]~~	+	[[Category: Yuan H]]
-	~~[[Category: Oxygen transport]]~~	+
-	~~[[Category: Sperm whale~~]]	+

OCA at 21:19, 28 October 2020

OCA — Wed, 28 Oct 2020 21:19:04 GMT

←Older revision		Revision as of 21:19, 28 October 2020
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	==X-ray structure of sperm whale V21C/V66C/F46S myoglobin mutant with an intramolecular disulfide bond==		==X-ray structure of sperm whale V21C/V66C/F46S myoglobin mutant with an intramolecular disulfide bond==
-	<StructureSection load='5zeo' size='340' side='right' caption='[[5zeo]], [[Resolution\|resolution]] 1.77Å' scene=''>	+	<StructureSection load='5zeo' size='340' side='right'caption='[[5zeo]], [[Resolution\|resolution]] 1.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5zeo]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZEO OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5ZEO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5zeo]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZEO OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5ZEO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5zeo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zeo OCA], [http://pdbe.org/5zeo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zeo RCSB], [http://www.ebi.ac.uk/pdbsum/5zeo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zeo ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5zeo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zeo OCA], [http://pdbe.org/5zeo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zeo RCSB], [http://www.ebi.ac.uk/pdbsum/5zeo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zeo ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	</div>		</div>
	<div class="pdbe-citations 5zeo" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 5zeo" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Myoglobin 3D structures\|Myoglobin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Yuan, H]]		[[Category: Yuan, H]]
	[[Category: Myoglobin]]		[[Category: Myoglobin]]
	[[Category: Oxygen transport]]		[[Category: Oxygen transport]]
	[[Category: Sperm whale]]		[[Category: Sperm whale]]

OCA at 06:14, 9 May 2018

OCA — Wed, 09 May 2018 06:14:49 GMT

←Older revision		Revision as of 06:14, 9 May 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 5zeo is ~~ON HOLD until Paper~~ Publication	+	==X-ray structure of sperm whale V21C/V66C/F46S myoglobin mutant with an intramolecular disulfide bond==
		+	<StructureSection load='5zeo' size='340' side='right' caption='[[5zeo]], [[Resolution\|resolution]] 1.77Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5zeo]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZEO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ZEO FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5zeo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zeo OCA], [http://pdbe.org/5zeo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zeo RCSB], [http://www.ebi.ac.uk/pdbsum/5zeo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zeo ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/MYG_PHYCD MYG_PHYCD]] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	A de novo designed intramolecular disulfide bond in myoglobin, resembling that in cytoglobin without structural evidence, was confirmed by an X-ray structure for the first time and was demonstrated to regulate both the structure and function of this protein, which fulfills the design of an artificial dehaloperoxidase, with an activity exceeding that of a native enzyme.

-	~~Authors~~: ~~Yuan~~, H.	+	Regulation of both the structure and function by a de novo designed disulfide bond: a case study of heme proteins in myoglobin.,Yin LL, Yuan H, Du KJ, He B, Gao SQ, Wen GB, Tan X, Lin YW Chem Commun (Camb). 2018 Apr 24;54(34):4356-4359. doi: 10.1039/c8cc01646a. PMID:29645029<ref>PMID:29645029</ref>

-	~~Description: X-ray structure~~ of ~~sperm whale V21C~~/~~V66C/F46S myoglobin mutant with an intramolecular disulfide bond~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[Category~~: ~~Unreleased Structures]]~~	+	</div>
		+	<div class="pdbe-citations 5zeo" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Yuan, H]]		[[Category: Yuan, H]]
		+	[[Category: Myoglobin]]
		+	[[Category: Oxygen transport]]
		+	[[Category: Sperm whale]]

OCA at 12:16, 11 April 2018

OCA — Wed, 11 Apr 2018 12:16:14 GMT

←Older revision		Revision as of 12:16, 11 April 2018
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5zeo is ON HOLD	+	The entry 5zeo is ON HOLD until Paper Publication

	Authors: Yuan, H.		Authors: Yuan, H.

OCA: Protected "5zeo" [edit=sysop:move=sysop]

OCA — Thu, 08 Mar 2018 03:39:16 GMT

Protected "5zeo" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:39, 8 March 2018

OCA: New page: '''Unreleased structure''' The entry 5zeo is ON HOLD Authors: Yuan, H. Description: X-ray structure of sperm whale V21C/V66C/F46S myoglobin mutant with an intramolecular disulfide bond...

OCA — Thu, 08 Mar 2018 03:39:14 GMT

New page: '''Unreleased structure''' The entry 5zeo is ON HOLD Authors: Yuan, H. Description: X-ray structure of sperm whale V21C/V66C/F46S myoglobin mutant with an intramolecular disulfide bond...

New page

'''Unreleased structure'''

The entry 5zeo is ON HOLD

Authors: Yuan, H.

Description: X-ray structure of sperm whale V21C/V66C/F46S myoglobin mutant with an intramolecular disulfide bond
[[Category: Unreleased Structures]]
[[Category: Yuan, H]]