6aqx - Revision history

OCA at 14:23, 4 October 2023

OCA — Wed, 04 Oct 2023 14:23:23 GMT

←Older revision		Revision as of 14:23, 4 October 2023
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	<StructureSection load='6aqx' size='340' side='right'caption='[[6aqx]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='6aqx' size='340' side='right'caption='[[6aqx]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6aqx]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AQX OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6AQX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6aqx]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AQX FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aqx OCA], [~~http~~://pdbe.org/6aqx PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6aqx RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6aqx PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6aqx ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.55Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aqx OCA], [https://pdbe.org/6aqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6aqx RCSB], [https://www.ebi.ac.uk/pdbsum/6aqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6aqx ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Dauter, Z~~]]	+	[[Category: Synthetic construct]]
-	[[Category: ~~Gilski, M]]~~	+	[[Category: Dauter Z]]
-	~~[[Category: Luo,~~ Z]]	+	[[Category: Gilski M]]
-	[[Category: ~~Dna]]~~	+	[[Category: Luo Z]]
-	~~[[Category: Twinning~~]]	+
-	[[Category: Z~~-dna~~]]	+

OCA at 21:30, 28 October 2020

OCA — Wed, 28 Oct 2020 21:30:52 GMT

←Older revision		Revision as of 21:30, 28 October 2020
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	==Crystal Structure of Z-DNA with 6-fold Twinning_Z4B==		==Crystal Structure of Z-DNA with 6-fold Twinning_Z4B==
-	<StructureSection load='6aqx' size='340' side='right' caption='[[6aqx]], [[Resolution\|resolution]] 1.55Å' scene=''>	+	<StructureSection load='6aqx' size='340' side='right'caption='[[6aqx]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6aqx]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AQX OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6AQX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6aqx]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AQX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6AQX FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aqx OCA], [http://pdbe.org/6aqx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6aqx RCSB], [http://www.ebi.ac.uk/pdbsum/6aqx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6aqx ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aqx OCA], [http://pdbe.org/6aqx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6aqx RCSB], [http://www.ebi.ac.uk/pdbsum/6aqx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6aqx ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Dauter, Z]]		[[Category: Dauter, Z]]
	[[Category: Gilski, M]]		[[Category: Gilski, M]]

OCA at 10:18, 15 November 2017

OCA — Wed, 15 Nov 2017 10:18:05 GMT

←Older revision		Revision as of 10:18, 15 November 2017
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	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aqx OCA], [http://pdbe.org/6aqx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6aqx RCSB], [http://www.ebi.ac.uk/pdbsum/6aqx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6aqx ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aqx OCA], [http://pdbe.org/6aqx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6aqx RCSB], [http://www.ebi.ac.uk/pdbsum/6aqx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6aqx ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	DNA oligomer duplexes containing alternating cytosines and guanines in their sequences tend to form left-handed helices of the Z-DNA type, with the sugar and phosphate backbone in a zigzag conformation and a helical repeat of two successive nucleotides. Z-DNA duplexes usually crystallize as hexagonally arranged parallel helical tubes, with various relative orientations and translation of neighboring duplexes. Four novel high-resolution crystal structures of d(CGCGCG)2 duplexes are described here. They are characterized by a high degree of pseudosymmetry and/or twinning, with three or four independent duplexes differently oriented in a monoclinic P21 lattice of hexagonal metric. The various twinning criteria give somewhat conflicting indications in these complicated cases of crystal pathology. The details of molecular packing in these crystal structures are compared with other known crystal forms of Z-DNA.
		+
		+	Four highly pseudosymmetric and/or twinned structures of d(CGCGCG)2 extend the repertoire of crystal structures of Z-DNA.,Luo Z, Dauter Z, Gilski M Acta Crystallogr D Struct Biol. 2017 Nov 1;73(Pt 11):940-951. doi:, 10.1107/S2059798317014954. Epub 2017 Oct 30. PMID:29095165<ref>PMID:29095165</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6aqx" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Z-DNA\|Z-DNA]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA: Protected "6aqx" [edit=sysop:move=sysop]

OCA — Tue, 05 Sep 2017 14:54:53 GMT

Protected "6aqx" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:54, 5 September 2017

OCA: New page: ==Crystal Structure of Z-DNA with 6-fold Twinning_Z4B== == Struct...

OCA — Tue, 05 Sep 2017 14:54:51 GMT

New page: ==Crystal Structure of Z-DNA with 6-fold Twinning_Z4B== <StructureSection load='6aqx' size='340' side='right' caption='6aqx, resolution 1.55Å' scene=''> == Struct...

New page

==Crystal Structure of Z-DNA with 6-fold Twinning_Z4B==
<StructureSection load='6aqx' size='340' side='right' caption='[[6aqx]], [[Resolution|resolution]] 1.55Å' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6aqx]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AQX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AQX FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aqx OCA], [http://pdbe.org/6aqx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6aqx RCSB], [http://www.ebi.ac.uk/pdbsum/6aqx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6aqx ProSAT]</span></td></tr>
</table>
__TOC__
</StructureSection>
[[Category: Dauter, Z]]
[[Category: Gilski, M]]
[[Category: Luo, Z]]
[[Category: Dna]]
[[Category: Twinning]]
[[Category: Z-dna]]