6atx - Revision history

OCA at 14:24, 4 October 2023

OCA — Wed, 04 Oct 2023 14:24:55 GMT

←Older revision		Revision as of 14:24, 4 October 2023
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	==Crystal structure of Physcomitrella patens KAI2-like C==		==Crystal structure of Physcomitrella patens KAI2-like C==
-	<StructureSection load='6atx' size='340' side='right'caption='[[6atx]]' scene=''>	+	<StructureSection load='6atx' size='340' side='right'caption='[[6atx]], [[Resolution\|resolution]] 2.74Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ATX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ATX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6atx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physcomitrium_patens Physcomitrium patens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ATX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ATX FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6atx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6atx OCA], [https://pdbe.org/6atx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6atx RCSB], [https://www.ebi.ac.uk/pdbsum/6atx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6atx ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.7403378Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6atx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6atx OCA], [https://pdbe.org/6atx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6atx RCSB], [https://www.ebi.ac.uk/pdbsum/6atx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6atx ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A9SKF7_PHYPA A9SKF7_PHYPA]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	In plants, strigolactones are perceived by the dual receptor-hydrolase DWARF14 (D14). D14 belongs to the superfamily of alpha/beta hydrolases and is structurally similar to the karrikin receptor KARRIKIN INSENSITIVE 2 (KAI2). The moss Physcomitrella patens is an ideal model system for studying this receptor family, because it includes 11 highly related family members with unknown ligand specificity. We present the crystal structures of three Physcomitrella D14/KAI2-like proteins and describe a loop-based mechanism that leads to a permanent widening of the hydrophobic substrate gorge. We have identified protein clades that specifically perceive the karrikin KAR1 and the non-natural strigolactone isomer (-)-5-deoxystrigol in a highly stereoselective manner.
		+
		+	Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens.,Burger M, Mashiguchi K, Lee HJ, Nakano M, Takemoto K, Seto Y, Yamaguchi S, Chory J Cell Rep. 2019 Jan 22;26(4):855-865.e5. doi: 10.1016/j.celrep.2019.01.003. PMID:30673608<ref>PMID:30673608</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6atx" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Physcomitrium patens]]
	[[Category: Burger M]]		[[Category: Burger M]]
	[[Category: Chory J]]		[[Category: Chory J]]
	[[Category: Lee HJ]]		[[Category: Lee HJ]]

OCA at 10:14, 18 March 2021

OCA — Thu, 18 Mar 2021 10:14:55 GMT

←Older revision		Revision as of 10:14, 18 March 2021
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	<StructureSection load='6atx' size='340' side='right'caption='[[6atx]]' scene=''>		<StructureSection load='6atx' size='340' side='right'caption='[[6atx]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ATX OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6ATX FirstGlance]. <br>	+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ATX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ATX FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6atx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6atx OCA], [~~http~~://pdbe.org/6atx PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6atx RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6atx PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6atx ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6atx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6atx OCA], [https://pdbe.org/6atx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6atx RCSB], [https://www.ebi.ac.uk/pdbsum/6atx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6atx ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 21:32, 28 October 2020

OCA — Wed, 28 Oct 2020 21:32:11 GMT

←Older revision		Revision as of 21:32, 28 October 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 6atx is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of Physcomitrella patens KAI2-like C==
-		+	<StructureSection load='6atx' size='340' side='right'caption='[[6atx]]' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ATX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6ATX FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6atx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6atx OCA], [http://pdbe.org/6atx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6atx RCSB], [http://www.ebi.ac.uk/pdbsum/6atx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6atx ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Burger M]]
		+	[[Category: Chory J]]
		+	[[Category: Lee HJ]]

OCA: Protected "6atx" [edit=sysop:move=sysop]

OCA — Wed, 27 Sep 2017 16:47:13 GMT

Protected "6atx" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:47, 27 September 2017

OCA: New page: '''Unreleased structure''' The entry 6atx is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

OCA — Wed, 27 Sep 2017 16:47:12 GMT

New page: '''Unreleased structure''' The entry 6atx is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6atx is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]