6bdu - Revision history

OCA at 08:33, 8 January 2020

OCA — Wed, 08 Jan 2020 08:33:41 GMT

←Older revision		Revision as of 08:33, 8 January 2020
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	==Crystal structure of PprA from Deinococcus radiodurans==		==Crystal structure of PprA from Deinococcus radiodurans==
-	<StructureSection load='6bdu' size='340' side='right' caption='[[6bdu]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='6bdu' size='340' side='right'caption='[[6bdu]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6bdu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BDU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BDU FirstGlance]. <br>		<table><tr><td colspan='2'>[[6bdu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BDU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BDU FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Deira]]		[[Category: Deira]]
		+	[[Category: Large Structures]]
	[[Category: Czerwinski, M]]		[[Category: Czerwinski, M]]
	[[Category: Junop, M S]]		[[Category: Junop, M S]]

OCA at 07:49, 21 February 2019

OCA — Thu, 21 Feb 2019 07:49:07 GMT

←Older revision		Revision as of 07:49, 21 February 2019
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	<StructureSection load='6bdu' size='340' side='right' caption='[[6bdu]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='6bdu' size='340' side='right' caption='[[6bdu]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6bdu]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BDU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BDU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6bdu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BDU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BDU FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pprA, DR_A0346 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243230 DEIRA])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bdu OCA], [http://pdbe.org/6bdu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bdu RCSB], [http://www.ebi.ac.uk/pdbsum/6bdu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bdu ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bdu OCA], [http://pdbe.org/6bdu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bdu RCSB], [http://www.ebi.ac.uk/pdbsum/6bdu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bdu ProSAT]</span></td></tr>
	</table>		</table>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Deira]]
	[[Category: Czerwinski, M]]		[[Category: Czerwinski, M]]
	[[Category: Junop, M S]]		[[Category: Junop, M S]]

OCA at 10:04, 5 September 2018

OCA — Wed, 05 Sep 2018 10:04:44 GMT

←Older revision		Revision as of 10:04, 5 September 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 6bdu is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of PprA from Deinococcus radiodurans==
-		+	<StructureSection load='6bdu' size='340' side='right' caption='[[6bdu]], [[Resolution\|resolution]] 2.00Å' scene=''>
-	~~Authors~~: ~~Szabla~~, R., ~~Czerwinski~~, M., ~~Junop~~, M.S.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6bdu]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BDU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BDU FirstGlance]. <br>
-	~~Description: Crystal structure of PprA from Deinococcus radiodurans~~	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bdu OCA], [http://pdbe.org/6bdu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bdu RCSB], [http://www.ebi.ac.uk/pdbsum/6bdu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bdu ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PPRA_DEIRA PPRA_DEIRA]] dsDNA-binding protein that contributes to the ionizing radiation resistance of D.radiodurans. Plays a role in DNA repair and genome reconstitution, and is necessary for recovery from severe genomic fragmentation as a result of exposure to severe levels of ionizing radiation. In vitro, binds to double-stranded DNA carrying strand breaks and stimulates the DNA end-joining reaction catalyzed by DNA ligases. Thus, PprA plays a critical role in a non-homologous end-joining (NHEJ) pathway for the repair of radiation-induced DNA double-strands breaks. Cannot bind to dsDNA without strand breaks or single-stranded DNA.<ref>PMID:15454524</ref> <ref>PMID:15458422</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Czerwinski, M]]		[[Category: Czerwinski, M]]
-	[[Category: Junop, M.S]]	+	[[Category: Junop, M S]]
	[[Category: Szabla, R]]		[[Category: Szabla, R]]
		+	[[Category: Dna binding protein]]
		+	[[Category: Dna damage repair]]
		+	[[Category: Filment formation]]
		+	[[Category: Genome segregation]]
		+	[[Category: Radiation induced]]

OCA at 06:31, 22 November 2017

OCA — Wed, 22 Nov 2017 06:31:36 GMT

←Older revision		Revision as of 06:31, 22 November 2017
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6bdu is ON HOLD	+	The entry 6bdu is ON HOLD until Paper Publication

	Authors: Szabla, R., Czerwinski, M., Junop, M.S.		Authors: Szabla, R., Czerwinski, M., Junop, M.S.

OCA: Protected "6bdu" [edit=sysop:move=sysop]

OCA — Wed, 01 Nov 2017 04:57:59 GMT

Protected "6bdu" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:57, 1 November 2017

OCA: New page: '''Unreleased structure''' The entry 6bdu is ON HOLD Authors: Szabla, R., Czerwinski, M., Junop, M.S. Description: Crystal structure of PprA from Deinococcus radiodurans [[Category: Un...

OCA — Wed, 01 Nov 2017 04:57:58 GMT

New page: '''Unreleased structure''' The entry 6bdu is ON HOLD Authors: Szabla, R., Czerwinski, M., Junop, M.S. Description: Crystal structure of PprA from Deinococcus radiodurans [[Category: Un...

New page

'''Unreleased structure'''

The entry 6bdu is ON HOLD

Authors: Szabla, R., Czerwinski, M., Junop, M.S.

Description: Crystal structure of PprA from Deinococcus radiodurans
[[Category: Unreleased Structures]]
[[Category: Czerwinski, M]]
[[Category: Junop, M.S]]
[[Category: Szabla, R]]