6bri - Revision history

OCA at 14:49, 4 October 2023

OCA — Wed, 04 Oct 2023 14:49:08 GMT

←Older revision		Revision as of 14:49, 4 October 2023
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	<StructureSection load='6bri' size='340' side='right'caption='[[6bri]], [[Resolution\|resolution]] 3.27Å' scene=''>		<StructureSection load='6bri' size='340' side='right'caption='[[6bri]], [[Resolution\|resolution]] 3.27Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6bri]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Stamf Stamf~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BRI OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6BRI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6bri]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylothermus_marinus_F1 Staphylothermus marinus F1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BRI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BRI FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=HGI:MERCURY+(II)+IODIDE'>HGI</scene>, <scene name='pdbligand=HGN:mercuriomercury'>HGN</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.266Å</td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Smar_1008 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=399550 STAMF])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=HGI:MERCURY+(II)+IODIDE'>HGI</scene>, <scene name='pdbligand=HGN:mercuriomercury'>HGN</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bri OCA], [~~http~~://pdbe.org/6bri PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6bri RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6bri PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6bri ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bri OCA], [https://pdbe.org/6bri PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6bri RCSB], [https://www.ebi.ac.uk/pdbsum/6bri PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6bri ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A3DN96_STAMF A3DN96_STAMF]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Stamf~~]]	+	[[Category: Staphylothermus marinus F1]]
-	[[Category: McDougall, M]]	+	[[Category: McDougall M]]
-	[[Category: Stetefeld, J]]	+	[[Category: Stetefeld J]]
-	[[Category: Trieu, B]]	+	[[Category: Trieu B]]
-	~~[[Category: Archaea]]~~	+
-	~~[[Category: Coiled-coil]]~~	+
-	~~[[Category: Mercury]]~~	+
-	~~[[Category: Metal binding protein]]~~	+
-	~~[[Category: Nanoparticle]]~~	+
-	~~[[Category: Nanotube~~]]	+

OCA at 08:36, 8 January 2020

OCA — Wed, 08 Jan 2020 08:36:42 GMT

←Older revision		Revision as of 08:36, 8 January 2020
Line 1:		Line 1:

	==RHCC with unreduced and reduced Mercury complexes==		==RHCC with unreduced and reduced Mercury complexes==
-	<StructureSection load='6bri' size='340' side='right' caption='[[6bri]], [[Resolution\|resolution]] 3.27Å' scene=''>	+	<StructureSection load='6bri' size='340' side='right'caption='[[6bri]], [[Resolution\|resolution]] 3.27Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6bri]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Stamf Stamf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BRI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BRI FirstGlance]. <br>		<table><tr><td colspan='2'>[[6bri]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Stamf Stamf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BRI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BRI FirstGlance]. <br>
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Stamf]]		[[Category: Stamf]]
	[[Category: McDougall, M]]		[[Category: McDougall, M]]

OCA at 06:23, 20 June 2018

OCA — Wed, 20 Jun 2018 06:23:51 GMT

←Older revision		Revision as of 06:23, 20 June 2018
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bri OCA], [http://pdbe.org/6bri PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bri RCSB], [http://www.ebi.ac.uk/pdbsum/6bri PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bri ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bri OCA], [http://pdbe.org/6bri PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bri RCSB], [http://www.ebi.ac.uk/pdbsum/6bri PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bri ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Coiled coils are well described as powerful oligomerization motifs and exhibit a large diversity of functions, including gene regulation, cell division, membrane fusion and drug extrusion. The archaea S-layer originated right-handed coiled coil -RHCC-NT- is characterized by extreme stability and is free of cysteine and histidine moieties. In the current study, we have followed a multidisciplinary approach to investigate the capacity of RHCC-NT to bind a variety of ionic complex metal ions. At the outside of the RHCC-NT, one mercury ion forms an electrostatic interaction with the S-methyl moiety of the single methionine residue present in each coil. We demonstrate that RHCC-NT is reducing and incorporating metallic mercury in the large-sized interior cavities which are lined up along the tetrameric channel.
		+
		+	Reductive power of the archaea right-handed coiled coil nanotube (RHCC-NT) and incorporation of mercury clusters inside protein cages.,McDougall M, McEleney K, Francisco O, Trieu B, Ogbomo EK, Tomy G, Stetefeld J J Struct Biol. 2018 Jun 5. pii: S1047-8477(18)30137-0. doi:, 10.1016/j.jsb.2018.05.013. PMID:29879486<ref>PMID:29879486</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6bri" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 07:06, 15 February 2018

OCA — Thu, 15 Feb 2018 07:06:14 GMT

←Older revision		Revision as of 07:06, 15 February 2018
Line 3:		Line 3:
	<StructureSection load='6bri' size='340' side='right' caption='[[6bri]], [[Resolution\|resolution]] 3.27Å' scene=''>		<StructureSection load='6bri' size='340' side='right' caption='[[6bri]], [[Resolution\|resolution]] 3.27Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6bri]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BRI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BRI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6bri]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Stamf Stamf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BRI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BRI FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=HGI:MERCURY+(II)+IODIDE'>HGI</scene>, <scene name='pdbligand=HGN:mercuriomercury'>HGN</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=HGI:MERCURY+(II)+IODIDE'>HGI</scene>, <scene name='pdbligand=HGN:mercuriomercury'>HGN</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Smar_1008 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=399550 STAMF])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bri OCA], [http://pdbe.org/6bri PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bri RCSB], [http://www.ebi.ac.uk/pdbsum/6bri PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bri ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bri OCA], [http://pdbe.org/6bri PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bri RCSB], [http://www.ebi.ac.uk/pdbsum/6bri PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bri ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Stamf]]
	[[Category: McDougall, M]]		[[Category: McDougall, M]]
	[[Category: Stetefeld, J]]		[[Category: Stetefeld, J]]

OCA at 06:19, 7 February 2018

OCA — Wed, 07 Feb 2018 06:19:52 GMT

←Older revision		Revision as of 06:19, 7 February 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6bri is ~~ON HOLD~~	+	==RHCC with unreduced and reduced Mercury complexes==
-		+	<StructureSection load='6bri' size='340' side='right' caption='[[6bri]], [[Resolution\|resolution]] 3.27Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6bri]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BRI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BRI FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=HGI:MERCURY+(II)+IODIDE'>HGI</scene>, <scene name='pdbligand=HGN:mercuriomercury'>HGN</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bri OCA], [http://pdbe.org/6bri PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bri RCSB], [http://www.ebi.ac.uk/pdbsum/6bri PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bri ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: McDougall, M]]
		+	[[Category: Stetefeld, J]]
		+	[[Category: Trieu, B]]
		+	[[Category: Archaea]]
		+	[[Category: Coiled-coil]]
		+	[[Category: Mercury]]
		+	[[Category: Metal binding protein]]
		+	[[Category: Nanoparticle]]
		+	[[Category: Nanotube]]

OCA: Protected "6bri" [edit=sysop:move=sysop]

OCA — Wed, 06 Dec 2017 06:08:47 GMT

Protected "6bri" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:08, 6 December 2017

OCA: New page: '''Unreleased structure''' The entry 6bri is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 06 Dec 2017 06:08:45 GMT

New page: '''Unreleased structure''' The entry 6bri is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6bri is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]