6egv - Revision history

OCA at 00:26, 11 April 2020

OCA — Sat, 11 Apr 2020 00:26:07 GMT

←Older revision		Revision as of 00:26, 11 April 2020
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	<SX load='6egv' size='340' side='right' viewer='molstar' caption='[[6egv]], [[Resolution\|resolution]] 3.18Å' scene=''>		<SX load='6egv' size='340' side='right' viewer='molstar' caption='[[6egv]], [[Resolution\|resolution]] 3.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6egv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacbrood_virus Sacbrood virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGV OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6EGV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6egv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacbrood_virus Sacbrood virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6EGV FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6egv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6egv OCA], [http://pdbe.org/6egv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6egv RCSB], [http://www.ebi.ac.uk/pdbsum/6egv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6egv ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6egv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6egv OCA], [http://pdbe.org/6egv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6egv RCSB], [http://www.ebi.ac.uk/pdbsum/6egv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6egv ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:05, 6 March 2020

OCA — Fri, 06 Mar 2020 21:05:27 GMT

←Older revision		Revision as of 21:05, 6 March 2020
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	==Sacbrood virus of honeybee==		==Sacbrood virus of honeybee==
-	<~~StructureSection~~ load='6egv' size='340' side='right'caption='[[6egv]], [[Resolution\|resolution]] 3.18Å' scene=''>	+	<SX load='6egv' size='340' side='right' viewer='molstar' caption='[[6egv]], [[Resolution\|resolution]] 3.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6egv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacbrood_virus Sacbrood virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EGV FirstGlance]. <br>		<table><tr><td colspan='2'>[[6egv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacbrood_virus Sacbrood virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EGV FirstGlance]. <br>
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	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Sacbrood virus]]		[[Category: Sacbrood virus]]

OCA at 17:56, 11 December 2019

OCA — Wed, 11 Dec 2019 17:56:20 GMT

←Older revision		Revision as of 17:56, 11 December 2019
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	==Sacbrood virus of honeybee==		==Sacbrood virus of honeybee==
-	<StructureSection load='6egv' size='340' side='right' caption='[[6egv]], [[Resolution\|resolution]] 3.18Å' scene=''>	+	<StructureSection load='6egv' size='340' side='right'caption='[[6egv]], [[Resolution\|resolution]] 3.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6egv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacbrood_virus Sacbrood virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EGV FirstGlance]. <br>		<table><tr><td colspan='2'>[[6egv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacbrood_virus Sacbrood virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EGV FirstGlance]. <br>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Sacbrood virus]]		[[Category: Sacbrood virus]]
	[[Category: Plevka, P]]		[[Category: Plevka, P]]

OCA at 07:39, 18 July 2018

OCA — Wed, 18 Jul 2018 07:39:49 GMT

←Older revision		Revision as of 07:39, 18 July 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 6egv is ~~ON HOLD until Paper~~ Publication	+	==Sacbrood virus of honeybee==
		+	<StructureSection load='6egv' size='340' side='right' caption='[[6egv]], [[Resolution\|resolution]] 3.18Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[6egv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacbrood_virus Sacbrood virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EGV FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6egv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6egv OCA], [http://pdbe.org/6egv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6egv RCSB], [http://www.ebi.ac.uk/pdbsum/6egv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6egv ProSAT]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Infection by sacbrood virus (SBV) from the family Iflaviridae is lethal to honey bee larvae but only rarely causes the collapse of honey bee colonies. Despite the negative effect of SBV on honey bees, the structure of its particles and mechanism of its genome delivery are unknown. Here we present the crystal structure of SBV virion and show that it contains 60 copies of a minor capsid protein (MiCP) attached to the virion surface. No similar MiCPs have been previously reported in any of the related viruses from the order Picornavirales. The location of the MiCP coding sequence within the SBV genome indicates that the MiCP evolved from a C-terminal extension of a major capsid protein by the introduction of a cleavage site for a virus protease. The exposure of SBV to acidic pH, which the virus likely encounters during cell entry, induces the formation of pores at threefold and fivefold axes of the capsid that are 7 A and 12 A in diameter, respectively. This is in contrast to vertebrate picornaviruses, in which the pores along twofold icosahedral symmetry axes are currently considered the most likely sites for genome release. SBV virions lack VP4 subunits that facilitate the genome delivery of many related dicistroviruses and picornaviruses. MiCP subunits induce liposome disruption in vitro, indicating that they are functional analogs of VP4 subunits and enable the virus genome to escape across the endosome membrane into the cell cytoplasm.

-	~~Authors~~:	+	Virion structure and genome delivery mechanism of sacbrood honeybee virus.,Prochazkova M, Fuzik T, Skubnik K, Moravcova J, Ubiparip Z, Pridal A, Plevka P Proc Natl Acad Sci U S A. 2018 Jul 9. pii: 1722018115. doi:, 10.1073/pnas.1722018115. PMID:29987012<ref>PMID:29987012</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased Structures~~]]	+	</div>
		+	<div class="pdbe-citations 6egv" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Sacbrood virus]]
		+	[[Category: Plevka, P]]
		+	[[Category: Prochazkova, M]]
		+	[[Category: Full particle]]
		+	[[Category: Icosahedral virus particle]]
		+	[[Category: Iflavirus]]
		+	[[Category: Virus]]

OCA at 04:15, 25 April 2018

OCA — Wed, 25 Apr 2018 04:15:31 GMT

←Older revision		Revision as of 04:15, 25 April 2018
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6egv is ON HOLD	+	The entry 6egv is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "6egv" [edit=sysop:move=sysop]

OCA — Wed, 27 Sep 2017 17:09:03 GMT

Protected "6egv" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:09, 27 September 2017

OCA: New page: '''Unreleased structure''' The entry 6egv is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 27 Sep 2017 17:09:02 GMT

New page: '''Unreleased structure''' The entry 6egv is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6egv is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]