6eis - Revision history

OCA at 08:41, 26 September 2018

OCA — Wed, 26 Sep 2018 08:41:44 GMT

←Older revision		Revision as of 08:41, 26 September 2018
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	<StructureSection load='6eis' size='340' side='right' caption='[[6eis]], [[Resolution\|resolution]] 2.36Å' scene=''>		<StructureSection load='6eis' size='340' side='right' caption='[[6eis]], [[Resolution\|resolution]] 2.36Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6eis]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EIS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EIS FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6eis]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EIS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EIS FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=B6N:1-[4-fluoranyl-2-(trifluoromethyl)phenyl]-9-(1~{H}-pyrazol-4-yl)benzo[h][1,6]naphthyridin-2-one'>B6N</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=B6N:1-[4-fluoranyl-2-(trifluoromethyl)phenyl]-9-(1~{H}-pyrazol-4-yl)benzo[h][1,6]naphthyridin-2-one'>B6N</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DYRK1A, DYRK, MNB, MNBH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dual-specificity_kinase Dual-specificity kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.12.1 2.7.12.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dual-specificity_kinase Dual-specificity kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.12.1 2.7.12.1] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6eis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6eis OCA], [http://pdbe.org/6eis PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6eis RCSB], [http://www.ebi.ac.uk/pdbsum/6eis PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6eis ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6eis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6eis OCA], [http://pdbe.org/6eis PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6eis RCSB], [http://www.ebi.ac.uk/pdbsum/6eis PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6eis ProSAT]</span></td></tr>
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	</StructureSection>		</StructureSection>
	[[Category: Dual-specificity kinase]]		[[Category: Dual-specificity kinase]]
		+	[[Category: Human]]
	[[Category: Rothweiler, U]]		[[Category: Rothweiler, U]]
	[[Category: Dual specificity tyrosine-phosphorylation-regulated kinase 1a]]		[[Category: Dual specificity tyrosine-phosphorylation-regulated kinase 1a]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 07:30, 29 August 2018

OCA — Wed, 29 Aug 2018 07:30:38 GMT

←Older revision		Revision as of 07:30, 29 August 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 6eis is ~~ON HOLD~~ ~~until Paper~~ Publication	+	==DYRK1A in complex with JWC-055==
		+	<StructureSection load='6eis' size='340' side='right' caption='[[6eis]], [[Resolution\|resolution]] 2.36Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[6eis]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EIS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EIS FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=B6N:1-[4-fluoranyl-2-(trifluoromethyl)phenyl]-9-(1~{H}-pyrazol-4-yl)benzo[h][1,6]naphthyridin-2-one'>B6N</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dual-specificity_kinase Dual-specificity kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.12.1 2.7.12.1] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6eis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6eis OCA], [http://pdbe.org/6eis PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6eis RCSB], [http://www.ebi.ac.uk/pdbsum/6eis PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6eis ProSAT]</span></td></tr>
		+	</table>
		+	== Disease ==
		+	[[http://www.uniprot.org/uniprot/DYR1A_HUMAN DYR1A_HUMAN]] Defects in DYRK1A are the cause of mental retardation autosomal dominant type 7 (MRD7) [MIM:[http://omim.org/entry/614104 614104]]. A disease characterized by primary microcephaly, severe mental retardation without speech, anxious autistic behavior, and dysmorphic features, including bitemporal narrowing, deep-set eyes, large simple ears, and a pointed nasal tip. Mental retardation is characterized by significantly below average general intellectual functioning associated with impairments in adaptative behavior and manifested during the developmental period.<ref>PMID:21294719</ref>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/DYR1A_HUMAN DYR1A_HUMAN]] May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.<ref>PMID:8769099</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	DYRK1A is one of five members of the dual-specificity tyrosine (Y) phosphorylation-regulated kinase (DYRK) family. The DYRK1A gene is located in the Down syndrome critical region and regulates cellular processes related to proliferation and differentiation of neuronal progenitor cells during early development. This has focused research on its role in neuronal degenerative diseases, including Alzheimer's and Down syndrome. Recent studies have also shown a possible role of DYRK1A in diabetes. Here we report a variety of scaffolds not generally known for DYRK1A inhibition, demonstrating their effects in in vitro assays and also in cell cultures. These inhibitors effectively block the tau phosphorylation that is a hallmark of Alzheimer's disease. The crystal structures of these inhibitors support the design of optimized and novel therapeutics.

-	~~Authors: Rothweiler~~, U.	+	Novel Scaffolds for Dual Specificity Tyrosine-Phosphorylation-Regulated Kinase (DYRK1A) Inhibitors.,Czarna A, Wang J, Zelencova D, Liu Y, Deng X, Choi HG, Zhang T, Zhou W, Chang JW, Kildalsen H, Seternes OM, Gray NS, Engh RA, Rothweiler U J Med Chem. 2018 Aug 23. doi: 10.1021/acs.jmedchem.7b01847. PMID:30095246<ref>PMID:30095246</ref>

-	~~Description: DYRK1A in complex with JWC~~-~~055~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased Structures~~]]	+	</div>
		+	<div class="pdbe-citations 6eis" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Dual-specificity kinase]]
	[[Category: Rothweiler, U]]		[[Category: Rothweiler, U]]
		+	[[Category: Dual specificity tyrosine-phosphorylation-regulated kinase 1a]]
		+	[[Category: Transferase]]

OCA: Protected "6eis" [edit=sysop:move=sysop]

OCA — Wed, 27 Sep 2017 17:13:48 GMT

Protected "6eis" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:13, 27 September 2017

OCA: New page: '''Unreleased structure''' The entry 6eis is ON HOLD until Paper Publication Authors: Rothweiler, U. Description: DYRK1A in complex with JWC-055 Category: Unreleased Structures [[C...

OCA — Wed, 27 Sep 2017 17:13:47 GMT

New page: '''Unreleased structure''' The entry 6eis is ON HOLD until Paper Publication Authors: Rothweiler, U. Description: DYRK1A in complex with JWC-055 Category: Unreleased Structures [[C...

New page

'''Unreleased structure'''

The entry 6eis is ON HOLD until Paper Publication

Authors: Rothweiler, U.

Description: DYRK1A in complex with JWC-055
[[Category: Unreleased Structures]]
[[Category: Rothweiler, U]]