6elx - Revision history

OCA at 09:12, 11 November 2020

OCA — Wed, 11 Nov 2020 09:12:23 GMT

←Older revision		Revision as of 09:12, 11 November 2020
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	==Oryza sativa DWARF14==		==Oryza sativa DWARF14==
-	<StructureSection load='6elx' size='340' side='right' caption='[[6elx]], [[Resolution\|resolution]] 1.35Å' scene=''>	+	<StructureSection load='6elx' size='340' side='right'caption='[[6elx]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6elx]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ELX OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6ELX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6elx]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ELX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6ELX FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6elx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6elx OCA], [http://pdbe.org/6elx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6elx RCSB], [http://www.ebi.ac.uk/pdbsum/6elx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6elx ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6elx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6elx OCA], [http://pdbe.org/6elx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6elx RCSB], [http://www.ebi.ac.uk/pdbsum/6elx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6elx ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Andersson, I]]		[[Category: Andersson, I]]
	[[Category: Carlsson, G H]]		[[Category: Carlsson, G H]]

OCA at 06:19, 9 May 2018

OCA — Wed, 09 May 2018 06:19:53 GMT

←Older revision		Revision as of 06:19, 9 May 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 6elx is ~~ON HOLD~~	+	==Oryza sativa DWARF14==
		+	<StructureSection load='6elx' size='340' side='right' caption='[[6elx]], [[Resolution\|resolution]] 1.35Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[6elx]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ELX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ELX FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6elx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6elx OCA], [http://pdbe.org/6elx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6elx RCSB], [http://www.ebi.ac.uk/pdbsum/6elx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6elx ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/D14_ORYSJ D14_ORYSJ]] Involved in strigolactone signaling pathway. May function downstream of strigolactone synthesis, as a component of hormone signaling or as an enzyme that participates in the conversion of strigolactones to the bioactive form. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds.<ref>PMID:19542179</ref> <ref>PMID:23301669</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Strigolactones, a group of terpenoid lactones, control many aspects of plant growth and development, but the active forms of these plant hormones and their mode of action at the molecular level are still unknown. The strigolactone protein receptor is unusual because it has been shown to cleave the hormone and supposedly forms a covalent bond with the cleaved hormone fragment. This interaction is suggested to induce a conformational change in the receptor that primes it for subsequent interaction with partners in the signalling pathway. Substantial efforts have been invested into describing the interaction of synthetic strigolactone analogues with the receptor, resulting in a number of crystal structures. This investigation combines a re-evaluation of models in the Protein Data Bank with a search for new conditions that may permit the capture of a receptor-ligand complex. While weak difference density is frequently observed in the binding cavity, possibly due to a low-occupancy compound, the models often contain features not supported by the X-ray data. Thus, at this stage, we do not believe that any detailed deductions about the nature, conformation, or binding mode of the ligand can be made with any confidence.

-	~~Authors: Andersson, I~~., Carlsson~~, G.H.~~, Hasse, D.	+	The elusive ligand complexes of the DWARF14 strigolactone receptor.,Carlsson GH, Hasse D, Cardinale F, Prandi C, Andersson I J Exp Bot. 2018 Apr 23;69(9):2345-2354. doi: 10.1093/jxb/ery036. PMID:29394369<ref>PMID:29394369</ref>

-	~~Description: Oryza sativa DWARF14~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[Category~~: ~~Unreleased Structures]]~~	+	</div>
		+	<div class="pdbe-citations 6elx" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Andersson, I]]		[[Category: Andersson, I]]
		+	[[Category: Carlsson, G H]]
	[[Category: Hasse, D]]		[[Category: Hasse, D]]
-	[[Category: ~~Carlsson, G.H~~]]	+	[[Category: D14]]
		+	[[Category: Hydrolase]]
		+	[[Category: Ligand binding]]
		+	[[Category: Strigolactone]]
		+	[[Category: Strigolactone receptor]]

OCA: Protected "6elx" [edit=sysop:move=sysop]

OCA — Wed, 11 Oct 2017 05:41:55 GMT

Protected "6elx" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:41, 11 October 2017

OCA: New page: '''Unreleased structure''' The entry 6elx is ON HOLD Authors: Andersson, I., Carlsson, G.H., Hasse, D. Description: Oryza sativa DWARF14 Category: Unreleased Structures [[Category:...

OCA — Wed, 11 Oct 2017 05:41:54 GMT

New page: '''Unreleased structure''' The entry 6elx is ON HOLD Authors: Andersson, I., Carlsson, G.H., Hasse, D. Description: Oryza sativa DWARF14 Category: Unreleased Structures [[Category:...

New page

'''Unreleased structure'''

The entry 6elx is ON HOLD

Authors: Andersson, I., Carlsson, G.H., Hasse, D.

Description: Oryza sativa DWARF14
[[Category: Unreleased Structures]]
[[Category: Andersson, I]]
[[Category: Hasse, D]]
[[Category: Carlsson, G.H]]