OCA at 12:17, 7 November 2018

OCA — Wed, 07 Nov 2018 12:17:54 GMT

←Older revision		Revision as of 12:17, 7 November 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 6gdn is ~~ON HOLD~~	+	==Holliday Junctions formed from Telomeric DNA==
		+	<StructureSection load='6gdn' size='340' side='right' caption='[[6gdn]], [[Resolution\|resolution]] 3.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[6gdn]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GDN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GDN FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6gdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gdn OCA], [http://pdbe.org/6gdn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6gdn RCSB], [http://www.ebi.ac.uk/pdbsum/6gdn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6gdn ProSAT]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Cells have evolved inherent mechanisms, like homologous recombination (HR), to repair damaged DNA. However, repairs at telomeres can lead to genomic instability, often associated with cancer. While most rapidly dividing cells employ telomerase, the others maintain telomere length through HR-dependent alternative lengthening of telomeres (ALT) pathways. Here we describe the crystal structures of Holliday junction intermediates of the HR-dependent ALT mechanism. Using an extended human telomeric repeat, we also report the crystal structure of two Holliday junctions in close proximity, which associate together through strand exchange to form a hemicatenated double Holliday junction. Our combined structural results demonstrate that ACC nucleotides in the C-rich lagging strand (5'-CTAACCCTAA-3') at the telomere repeat sequence constitute a conserved structural feature that constrains crossover geometry and is a preferred site for Holliday junction formation in telomeres.

-	~~Authors: Parkinson, G.N~~., Haider, S., Li, P., Khiali, S., Munnur, D., Ramanathan, A.	+	Holliday Junctions Formed from Human Telomeric DNA.,Haider S, Li P, Khiali S, Munnur D, Ramanathan A, Parkinson GN J Am Chem Soc. 2018 Oct 30. doi: 10.1021/jacs.8b08699. PMID:30376323<ref>PMID:30376323</ref>

-	~~Description: Holliday Junctions formed from Telomeric DNA~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[Category: Unreleased Structures]]~~	+	</div>
-	~~[[Category~~: ~~Munnur, D]]~~	+	<div class="pdbe-citations 6gdn" style="background-color:#fffaf0;"></div>
-	~~[[Category: Khiali, S]]~~	+	== References ==
-	~~[[Category: Parkinson, G.N]]~~	+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Haider, S]]		[[Category: Haider, S]]
-	[[Category: ~~Ramanathan~~, A]]	+	[[Category: Khiali, S]]
	[[Category: Li, P]]		[[Category: Li, P]]
		+	[[Category: Munnur, D]]
		+	[[Category: Parkinson, G N]]
		+	[[Category: Ramanathan, A]]
		+	[[Category: Acc structural motif]]
		+	[[Category: Alt mechanism]]
		+	[[Category: Holliday junction]]
		+	[[Category: Homologous recombination]]
		+	[[Category: Recombination]]
		+	[[Category: Telomere]]

OCA: Protected "6gdn" [edit=sysop:move=sysop]

OCA — Wed, 02 May 2018 06:54:43 GMT

Protected "6gdn" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:54, 2 May 2018

OCA: New page: '''Unreleased structure''' The entry 6gdn is ON HOLD Authors: Parkinson, G.N., Haider, S., Li, P., Khiali, S., Munnur, D., Ramanathan, A. Description: Holliday Junctions formed from Te...

OCA — Wed, 02 May 2018 06:54:41 GMT

New page: '''Unreleased structure''' The entry 6gdn is ON HOLD Authors: Parkinson, G.N., Haider, S., Li, P., Khiali, S., Munnur, D., Ramanathan, A. Description: Holliday Junctions formed from Te...

New page

'''Unreleased structure'''

The entry 6gdn is ON HOLD

Authors: Parkinson, G.N., Haider, S., Li, P., Khiali, S., Munnur, D., Ramanathan, A.

Description: Holliday Junctions formed from Telomeric DNA
[[Category: Unreleased Structures]]
[[Category: Munnur, D]]
[[Category: Khiali, S]]
[[Category: Parkinson, G.N]]
[[Category: Haider, S]]
[[Category: Ramanathan, A]]
[[Category: Li, P]]

6gdn - Revision history

OCA at 12:17, 7 November 2018

OCA: Protected "6gdn" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 6gdn is ON HOLD Authors: Parkinson, G.N., Haider, S., Li, P., Khiali, S., Munnur, D., Ramanathan, A. Description: Holliday Junctions formed from Te...