6giy - Revision history

OCA at 01:01, 11 April 2020

OCA — Sat, 11 Apr 2020 01:01:01 GMT

←Older revision		Revision as of 01:01, 11 April 2020
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	<SX load='6giy' size='340' side='right' viewer='molstar' caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>		<SX load='6giy' size='340' side='right' viewer='molstar' caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6GIY FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6GIY FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EC55989_3322 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895]), EC55989_3321 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895]), EC55989_3338 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EC55989_3322 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895]), EC55989_3321 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895]), EC55989_3338 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6giy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6giy OCA], [http://pdbe.org/6giy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6giy RCSB], [http://www.ebi.ac.uk/pdbsum/6giy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6giy ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6giy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6giy OCA], [http://pdbe.org/6giy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6giy RCSB], [http://www.ebi.ac.uk/pdbsum/6giy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6giy ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:30, 6 March 2020

OCA — Fri, 06 Mar 2020 21:30:48 GMT

←Older revision		Revision as of 21:30, 6 March 2020
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	==The baseplate complex from the type VI secretion system==		==The baseplate complex from the type VI secretion system==
-	<~~StructureSection~~ load='6giy' size='340' side='right'caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>	+	<SX load='6giy' size='340' side='right' viewer='molstar' caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GIY FirstGlance]. <br>		<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GIY FirstGlance]. <br>
Line 19:		Line 19:
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
	[[Category: Large Structures]]		[[Category: Large Structures]]

OCA at 10:36, 18 December 2019

OCA — Wed, 18 Dec 2019 10:36:38 GMT

←Older revision		Revision as of 10:36, 18 December 2019
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	==The baseplate complex from the type VI secretion system==		==The baseplate complex from the type VI secretion system==
-	<StructureSection load='6giy' size='340' side='right' caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>	+	<StructureSection load='6giy' size='340' side='right'caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GIY FirstGlance]. <br>		<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GIY FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
		+	[[Category: Large Structures]]
	[[Category: Fronzes, R]]		[[Category: Fronzes, R]]
	[[Category: Rapisarda, C]]		[[Category: Rapisarda, C]]

OCA at 07:01, 24 October 2018

OCA — Wed, 24 Oct 2018 07:01:42 GMT

←Older revision		Revision as of 07:01, 24 October 2018
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	<StructureSection load='6giy' size='340' side='right' caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>		<StructureSection load='6giy' size='340' side='right' caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GIY FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GIY FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6giy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6giy OCA], [http://pdbe.org/6giy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6giy RCSB], [http://www.ebi.ac.uk/pdbsum/6giy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6giy ProSAT]</span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EC55989_3322 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895]), EC55989_3321 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895]), EC55989_3338 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6giy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6giy OCA], [http://pdbe.org/6giy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6giy RCSB], [http://www.ebi.ac.uk/pdbsum/6giy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6giy ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	To support their growth in a competitive environment and cause pathogenesis, bacteria have evolved a broad repertoire of macromolecular machineries to deliver specific effectors and toxins. Among these multiprotein complexes, the type VI secretion system (T6SS) is a contractile nanomachine that targets both prokaryotic and eukaryotic cells. The T6SS comprises two functional subcomplexes: a bacteriophage-related tail structure anchored to the cell envelope by a membrane complex. As in other contractile injection systems, the tail is composed of an inner tube wrapped by a sheath and built on the baseplate. In the T6SS, the baseplate is not only the tail assembly platform, but also docks the tail to the membrane complex and hence serves as an evolutionary adaptor. Here we define the biogenesis pathway and report the cryo-electron microscopy (cryo-EM) structure of the wedge protein complex of the T6SS from enteroaggregative Escherichia coli (EAEC). Using an integrative approach, we unveil the molecular architecture of the whole T6SS baseplate and its interaction with the tail sheath, offering detailed insights into its biogenesis and function. We discuss architectural and mechanistic similarities but also reveal key differences with the T4 phage and Mu phage baseplates.
		+
		+	Biogenesis and structure of a type VI secretion baseplate.,Cherrak Y, Rapisarda C, Pellarin R, Bouvier G, Bardiaux B, Allain F, Malosse C, Rey M, Chamot-Rooke J, Cascales E, Fronzes R, Durand E Nat Microbiol. 2018 Oct 15. pii: 10.1038/s41564-018-0260-1. doi:, 10.1038/s41564-018-0260-1. PMID:30323254<ref>PMID:30323254</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6giy" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacillus coli migula 1895]]
	[[Category: Fronzes, R]]		[[Category: Fronzes, R]]
	[[Category: Rapisarda, C]]		[[Category: Rapisarda, C]]

OCA at 08:08, 17 October 2018

OCA — Wed, 17 Oct 2018 08:08:14 GMT

←Older revision		Revision as of 08:08, 17 October 2018
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-	'''Unreleased structure'''

-	~~The entry 6giy is ON HOLD until Paper Publication~~	+	==The baseplate complex from the type VI secretion system==
-		+	<StructureSection load='6giy' size='340' side='right' caption='[[6giy]], [[Resolution\|resolution]] 4.30Å' scene=''>
-	~~Authors: Rapisarda, C., Fronzes, R.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6giy]] is a 9 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GIY FirstGlance]. <br>
-	~~Description:~~ The baseplate complex from the type VI secretion system	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6giy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6giy OCA], [http://pdbe.org/6giy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6giy RCSB], [http://www.ebi.ac.uk/pdbsum/6giy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6giy ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: Fronzes, R]]		[[Category: Fronzes, R]]
	[[Category: Rapisarda, C]]		[[Category: Rapisarda, C]]
		+	[[Category: Baseplate]]
		+	[[Category: Complex]]
		+	[[Category: Secretion]]
		+	[[Category: Structural protein]]

OCA at 04:17, 20 June 2018

OCA — Wed, 20 Jun 2018 04:17:53 GMT

←Older revision		Revision as of 04:17, 20 June 2018
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6giy is ON HOLD	+	The entry 6giy is ON HOLD until Paper Publication

	Authors: Rapisarda, C., Fronzes, R.		Authors: Rapisarda, C., Fronzes, R.

OCA: Protected "6giy" [edit=sysop:move=sysop]

OCA — Wed, 23 May 2018 06:10:42 GMT

Protected "6giy" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:10, 23 May 2018

OCA: New page: '''Unreleased structure''' The entry 6giy is ON HOLD Authors: Rapisarda, C., Fronzes, R. Description: The baseplate complex from the type VI secretion system [[Category: Unreleased Str...

OCA — Wed, 23 May 2018 06:10:41 GMT

New page: '''Unreleased structure''' The entry 6giy is ON HOLD Authors: Rapisarda, C., Fronzes, R. Description: The baseplate complex from the type VI secretion system [[Category: Unreleased Str...

New page

'''Unreleased structure'''

The entry 6giy is ON HOLD

Authors: Rapisarda, C., Fronzes, R.

Description: The baseplate complex from the type VI secretion system
[[Category: Unreleased Structures]]
[[Category: Fronzes, R]]
[[Category: Rapisarda, C]]