6hcg - Revision history

OCA at 01:19, 11 April 2020

OCA — Sat, 11 Apr 2020 01:19:13 GMT

←Older revision		Revision as of 01:19, 11 April 2020
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	<SX load='6hcg' size='340' side='right' viewer='molstar' caption='[[6hcg]], [[Resolution\|resolution]] 4.30Å' scene=''>		<SX load='6hcg' size='340' side='right' viewer='molstar' caption='[[6hcg]], [[Resolution\|resolution]] 4.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6hcg]] is a 45 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HCG OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6HCG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6hcg]] is a 45 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HCG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6HCG FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">gspD, pulD, B4U30_01620, BANRA_04386, BL124_00006830, C3F39_10150, CK508_015045, E0760_18600, E1814_01470, EAO17_18605, SK89_02022 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886]), BU230_24515 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886]), pulC, gspC, outC, B1727_29100, B4U22_01185, BL124_0006760, C3F39_10145, C9J88_23460, CPT10_02240, CSC88_13925, CWQ24_23120, KpST82_0728, PMK1_02469, SM57_00150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">gspD, pulD, B4U30_01620, BANRA_04386, BL124_00006830, C3F39_10150, CK508_015045, E0760_18600, E1814_01470, EAO17_18605, SK89_02022 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886]), BU230_24515 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886]), pulC, gspC, outC, B1727_29100, B4U22_01185, BL124_0006760, C3F39_10145, C9J88_23460, CPT10_02240, CSC88_13925, CWQ24_23120, KpST82_0728, PMK1_02469, SM57_00150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6hcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hcg OCA], [http://pdbe.org/6hcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hcg RCSB], [http://www.ebi.ac.uk/pdbsum/6hcg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hcg ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6hcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hcg OCA], [http://pdbe.org/6hcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hcg RCSB], [http://www.ebi.ac.uk/pdbsum/6hcg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hcg ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:39, 6 March 2020

OCA — Fri, 06 Mar 2020 21:39:57 GMT

←Older revision		Revision as of 21:39, 6 March 2020
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	==Klebsiella pneumoniae type II secretion system outer membrane complex. PulD, PulS and PulC HR domain.==		==Klebsiella pneumoniae type II secretion system outer membrane complex. PulD, PulS and PulC HR domain.==
-	<~~StructureSection~~ load='6hcg' size='340' side='right'caption='[[6hcg]], [[Resolution\|resolution]] 4.30Å' scene=''>	+	<SX load='6hcg' size='340' side='right' viewer='molstar' caption='[[6hcg]], [[Resolution\|resolution]] 4.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6hcg]] is a 45 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HCG FirstGlance]. <br>		<table><tr><td colspan='2'>[[6hcg]] is a 45 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HCG FirstGlance]. <br>
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	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Chernyatina, A A]]		[[Category: Chernyatina, A A]]

OCA at 18:27, 11 December 2019

OCA — Wed, 11 Dec 2019 18:27:28 GMT

←Older revision		Revision as of 18:27, 11 December 2019
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	<StructureSection load='6hcg' size='340' side='right'caption='[[6hcg]], [[Resolution\|resolution]] 4.30Å' scene=''>		<StructureSection load='6hcg' size='340' side='right'caption='[[6hcg]], [[Resolution\|resolution]] 4.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6hcg]] is a 45 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HCG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6hcg]] is a 45 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HCG FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hcg OCA], [http://pdbe.org/6hcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hcg RCSB], [http://www.ebi.ac.uk/pdbsum/6hcg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hcg ProSAT]</span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">gspD, pulD, B4U30_01620, BANRA_04386, BL124_00006830, C3F39_10150, CK508_015045, E0760_18600, E1814_01470, EAO17_18605, SK89_02022 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886]), BU230_24515 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886]), pulC, gspC, outC, B1727_29100, B4U22_01185, BL124_0006760, C3F39_10145, C9J88_23460, CPT10_02240, CSC88_13925, CWQ24_23120, KpST82_0728, PMK1_02469, SM57_00150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hcg OCA], [http://pdbe.org/6hcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hcg RCSB], [http://www.ebi.ac.uk/pdbsum/6hcg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hcg ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Bacterial type II secretion systems (T2SSs) translocate virulence factors, toxins and enzymes across the cell outer membrane. Here we use negative stain and cryo-electron microscopy to reveal the core architecture of an assembled T2SS from the pathogen Klebsiella pneumoniae. We show that 7 proteins form a ~2.4 MDa complex that spans the cell envelope. The outer membrane complex includes the secretin PulD, with all domains modelled, and the pilotin PulS. The inner membrane assembly platform components PulC, PulE, PulL, PulM and PulN have a relative stoichiometric ratio of 2:1:1:1:1. The PulE ATPase, PulL and PulM combine to form a flexible hexameric hub. Symmetry mismatch between the outer membrane complex and assembly platform is overcome by PulC linkers spanning the periplasm, with PulC HR domains binding independently at the secretin base. Our results show that the T2SS has a highly dynamic modular architecture, with implication for pseudo-pilus assembly and substrate loading.
		+
		+	Core architecture of a bacterial type II secretion system.,Chernyatina AA, Low HH Nat Commun. 2019 Nov 28;10(1):5437. doi: 10.1038/s41467-019-13301-3. PMID:31780649<ref>PMID:31780649</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6hcg" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 06:42, 27 November 2019

OCA — Wed, 27 Nov 2019 06:42:07 GMT

←Older revision		Revision as of 06:42, 27 November 2019
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-	'''Unreleased structure'''

-	~~The entry~~ 6hcg is ~~ON HOLD~~	+	==Klebsiella pneumoniae type II secretion system outer membrane complex. PulD, PulS and PulC HR domain.==
-		+	<StructureSection load='6hcg' size='340' side='right'caption='[[6hcg]], [[Resolution\|resolution]] 4.30Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6hcg]] is a 45 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HCG FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hcg OCA], [http://pdbe.org/6hcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hcg RCSB], [http://www.ebi.ac.uk/pdbsum/6hcg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hcg ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Chernyatina, A A]]
		+	[[Category: Low, H H]]
		+	[[Category: Outer membrane channel]]
		+	[[Category: Protein transport]]
		+	[[Category: Secretin]]
		+	[[Category: Type ii secretion system]]

OCA at 09:12, 13 November 2019

OCA — Wed, 13 Nov 2019 09:12:41 GMT

←Older revision		Revision as of 09:12, 13 November 2019
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6hcg is ON HOLD ~~until Nov 15 2020~~	+	The entry 6hcg is ON HOLD

	Authors:		Authors:

OCA at 04:54, 6 November 2019

OCA — Wed, 06 Nov 2019 04:54:53 GMT

←Older revision		Revision as of 04:54, 6 November 2019
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6hcg is ON HOLD	+	The entry 6hcg is ON HOLD until Nov 15 2020

	Authors:		Authors:

OCA at 07:12, 30 October 2019

OCA — Wed, 30 Oct 2019 07:12:41 GMT

←Older revision		Revision as of 07:12, 30 October 2019
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6hcg is ON HOLD ~~until Nov 15 2020~~	+	The entry 6hcg is ON HOLD

	Authors:		Authors:

OCA at 04:09, 24 July 2019

OCA — Wed, 24 Jul 2019 04:09:45 GMT

←Older revision		Revision as of 04:09, 24 July 2019
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6hcg is ON HOLD until ~~Aug~~ 15 2020	+	The entry 6hcg is ON HOLD until Nov 15 2020

	Authors:		Authors:

OCA: Protected "6hcg" [edit=sysop:move=sysop]

OCA — Wed, 22 Aug 2018 04:56:55 GMT

Protected "6hcg" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:56, 22 August 2018

OCA: New page: '''Unreleased structure''' The entry 6hcg is ON HOLD until Aug 15 2020 Authors: Description: Category: Unreleased Structures

OCA — Wed, 22 Aug 2018 04:56:54 GMT

New page: '''Unreleased structure''' The entry 6hcg is ON HOLD until Aug 15 2020 Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6hcg is ON HOLD until Aug 15 2020

Authors:

Description:
[[Category: Unreleased Structures]]