6hqf - Revision history

OCA at 10:25, 15 November 2023

OCA — Wed, 15 Nov 2023 10:25:32 GMT

←Older revision		Revision as of 10:25, 15 November 2023
Line 3:		Line 3:
	<StructureSection load='6hqf' size='340' side='right'caption='[[6hqf]], [[Resolution\|resolution]] 1.76Å' scene=''>		<StructureSection load='6hqf' size='340' side='right'caption='[[6hqf]], [[Resolution\|resolution]] 1.76Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6hqf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Petcr Petcr~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HQF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HQF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6hqf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Petroselinum_crispum Petroselinum crispum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HQF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HQF FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=PPH:~~[~~(1R)-~~1~~-AMINO-2-PHENYLETHYL]PHOSPHONIC+ACID'>PPH</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.76Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MDO:{2-[(1S)-1-AMINOETHYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>MDO</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MDO:{2-[(1S)-1-AMINOETHYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>MDO</scene>, <scene name='pdbligand=PPH:[(1R)-1-AMINO-2-PHENYLETHYL]PHOSPHONIC+ACID'>PPH</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>~~[~~[Gene\|Gene:]]</b></td><td class="sblockDat">PAL1~~ (~~[https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4043 PETCR]~~)~~</td></tr>~~	+
-	~~<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phenylalanine_ammonia~~-~~lyase Phenylalanine ammonia~~-~~lyase], with EC number [https://www.brenda~~-~~enzymes.info/php/result_flat.php4?ecno=4.3.1.24 4.3.1.24~~] </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hqf OCA], [https://pdbe.org/6hqf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hqf RCSB], [https://www.ebi.ac.uk/pdbsum/6hqf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hqf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hqf OCA], [https://pdbe.org/6hqf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hqf RCSB], [https://www.ebi.ac.uk/pdbsum/6hqf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hqf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PAL1_PETCR PAL1_PETCR]] This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton.	+	[https://www.uniprot.org/uniprot/PAL1_PETCR PAL1_PETCR] This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Petcr]]~~	+	[[Category: Petroselinum crispum]]
-	~~[[Category: Phenylalanine ammonia-lyase~~]]	+	[[Category: Bata Z]]
-	[[Category: Bata, Z]]	+	[[Category: Leveles I]]
-	[[Category: Leveles, I]]	+	[[Category: Molnar B]]
-	[[Category: Molnar, B]]	+	[[Category: Poppe L]]
-	[[Category: Poppe, L]]	+	[[Category: Vertessy GB]]
-	[[Category: Vertessy~~, G B]]~~	+
-	~~[[Category: Compex with inhibitor]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Mio group]]~~	+
-	~~[[Category: Plant enzyme~~]]	+

OCA at 06:59, 7 April 2021

OCA — Wed, 07 Apr 2021 06:59:39 GMT

←Older revision		Revision as of 06:59, 7 April 2021
Line 3:		Line 3:
	<StructureSection load='6hqf' size='340' side='right'caption='[[6hqf]], [[Resolution\|resolution]] 1.76Å' scene=''>		<StructureSection load='6hqf' size='340' side='right'caption='[[6hqf]], [[Resolution\|resolution]] 1.76Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6hqf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HQF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6HQF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6hqf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Petcr Petcr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HQF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HQF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PPH:[(1R)-1-AMINO-2-PHENYLETHYL]PHOSPHONIC+ACID'>PPH</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PPH:[(1R)-1-AMINO-2-PHENYLETHYL]PHOSPHONIC+ACID'>PPH</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MDO:{2-[(1S)-1-AMINOETHYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>MDO</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MDO:{2-[(1S)-1-AMINOETHYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>MDO</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Phenylalanine_ammonia-lyase Phenylalanine ammonia-lyase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.24 4.3.1.24] </span></td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PAL1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4043 PETCR])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6hqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hqf OCA], [~~http~~://pdbe.org/6hqf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6hqf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6hqf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6hqf ProSAT]</span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phenylalanine_ammonia-lyase Phenylalanine ammonia-lyase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.24 4.3.1.24] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hqf OCA], [https://pdbe.org/6hqf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hqf RCSB], [https://www.ebi.ac.uk/pdbsum/6hqf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hqf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PAL1_PETCR PAL1_PETCR]] This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton.	+	[[https://www.uniprot.org/uniprot/PAL1_PETCR PAL1_PETCR]] This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Petcr]]
	[[Category: Phenylalanine ammonia-lyase]]		[[Category: Phenylalanine ammonia-lyase]]
	[[Category: Bata, Z]]		[[Category: Bata, Z]]

OCA at 05:15, 10 October 2019

OCA — Thu, 10 Oct 2019 05:15:37 GMT

←Older revision		Revision as of 05:15, 10 October 2019
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6hqf is ~~ON HOLD until Paper Publication~~	+	==Structure of Phenylalanine ammonia-lyase from Petroselinum crispum in complex with (R)-APEP==
-		+	<StructureSection load='6hqf' size='340' side='right'caption='[[6hqf]], [[Resolution\|resolution]] 1.76Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6hqf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HQF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HQF FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PPH:[(1R)-1-AMINO-2-PHENYLETHYL]PHOSPHONIC+ACID'>PPH</scene></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MDO:{2-[(1S)-1-AMINOETHYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>MDO</scene></td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phenylalanine_ammonia-lyase Phenylalanine ammonia-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.24 4.3.1.24] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hqf OCA], [http://pdbe.org/6hqf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hqf RCSB], [http://www.ebi.ac.uk/pdbsum/6hqf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hqf ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PAL1_PETCR PAL1_PETCR]] This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Phenylalanine ammonia-lyase]]
		+	[[Category: Bata, Z]]
		+	[[Category: Leveles, I]]
		+	[[Category: Molnar, B]]
		+	[[Category: Poppe, L]]
		+	[[Category: Vertessy, G B]]
		+	[[Category: Compex with inhibitor]]
		+	[[Category: Lyase]]
		+	[[Category: Mio group]]
		+	[[Category: Plant enzyme]]

OCA: Protected "6hqf" [edit=sysop:move=sysop]

OCA — Wed, 03 Oct 2018 06:15:27 GMT

Protected "6hqf" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:15, 3 October 2018

OCA: New page: '''Unreleased structure''' The entry 6hqf is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

OCA — Wed, 03 Oct 2018 06:15:26 GMT

New page: '''Unreleased structure''' The entry 6hqf is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6hqf is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]