6ijo - Revision history

OCA at 01:47, 11 April 2020

OCA — Sat, 11 Apr 2020 01:47:06 GMT

←Older revision		Revision as of 01:47, 11 April 2020
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	<SX load='6ijo' size='340' side='right' viewer='molstar' caption='[[6ijo]], [[Resolution\|resolution]] 3.30Å' scene=''>		<SX load='6ijo' size='340' side='right' viewer='molstar' caption='[[6ijo]], [[Resolution\|resolution]] 3.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6ijo]] is a 23 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IJO OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6IJO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6ijo]] is a 23 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IJO OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6IJO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=LMU:DODECYL-ALPHA-D-MALTOSIDE'>LMU</scene>, <scene name='pdbligand=LUT:(3R,3R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>LUT</scene>, <scene name='pdbligand=NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL'>NEX</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=XAT:(3S,5R,6S,3S,5R,6S)-5,6,5,6-DIEPOXY-5,6,5,6-+TETRAHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>XAT</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=LMU:DODECYL-ALPHA-D-MALTOSIDE'>LMU</scene>, <scene name='pdbligand=LUT:(3R,3R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>LUT</scene>, <scene name='pdbligand=NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL'>NEX</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=XAT:(3S,5R,6S,3S,5R,6S)-5,6,5,6-DIEPOXY-5,6,5,6-+TETRAHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>XAT</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6ijo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ijo OCA], [http://pdbe.org/6ijo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ijo RCSB], [http://www.ebi.ac.uk/pdbsum/6ijo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ijo ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ijo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ijo OCA], [http://pdbe.org/6ijo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ijo RCSB], [http://www.ebi.ac.uk/pdbsum/6ijo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ijo ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 22:08, 6 March 2020

OCA — Fri, 06 Mar 2020 22:08:53 GMT

←Older revision		Revision as of 22:08, 6 March 2020
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	==Photosystem I of Chlamydomonas reinhardtii==		==Photosystem I of Chlamydomonas reinhardtii==
-	<~~StructureSection~~ load='6ijo' size='340' side='right'caption='[[6ijo]], [[Resolution\|resolution]] 3.30Å' scene=''>	+	<SX load='6ijo' size='340' side='right' viewer='molstar' caption='[[6ijo]], [[Resolution\|resolution]] 3.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6ijo]] is a 23 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IJO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IJO FirstGlance]. <br>		<table><tr><td colspan='2'>[[6ijo]] is a 23 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IJO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IJO FirstGlance]. <br>
Line 16:		Line 16:
	</div>		</div>
	<div class="pdbe-citations 6ijo" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 6ijo" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Photosystem I\|Photosystem I]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Chlamydomonas reinhardtii]]		[[Category: Chlamydomonas reinhardtii]]
	[[Category: Large Structures]]		[[Category: Large Structures]]

OCA at 07:06, 27 March 2019

OCA — Wed, 27 Mar 2019 07:06:24 GMT

←Older revision		Revision as of 07:06, 27 March 2019
Line 1:		Line 1:

-	==Photosystem of ~~green alga~~==	+	==Photosystem I of Chlamydomonas reinhardtii==
	<StructureSection load='6ijo' size='340' side='right'caption='[[6ijo]], [[Resolution\|resolution]] 3.30Å' scene=''>		<StructureSection load='6ijo' size='340' side='right'caption='[[6ijo]], [[Resolution\|resolution]] 3.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ijo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ijo OCA], [http://pdbe.org/6ijo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ijo RCSB], [http://www.ebi.ac.uk/pdbsum/6ijo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ijo ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ijo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ijo OCA], [http://pdbe.org/6ijo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ijo RCSB], [http://www.ebi.ac.uk/pdbsum/6ijo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ijo ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	During oxygenic photosynthesis, photosystems I and II (PSI and PSII) are essential for light-driven electron transport. Excitation energy transfer in PSI occurs extremely quickly, making it an efficient energy converter. In the alga Chlamydomonas reinhardtii (Cr), multiple units of light-harvesting complex I (LHCI) bind to the PSI core and function as peripheral antennae, forming a PSI-LHCI supercomplex. CrPSI-LHCI shows significantly larger antennae compared with plant PSI-LHCI while maintaining highly efficient energy transfer from LHCI to PSI. Here, we report structures of CrPSI-LHCI, solved by cryo-electron microscopy, revealing that up to ten LHCIs are associated with the PSI core. The structures provide detailed information about antenna organization and pigment arrangement within the supercomplexes. Highly populated and closely associated chlorophylls in the antennae explain the high efficiency of light harvesting and excitation energy transfer in CrPSI-LHCI.
		+
		+	Antenna arrangement and energy transfer pathways of a green algal photosystem-I-LHCI supercomplex.,Su X, Ma J, Pan X, Zhao X, Chang W, Liu Z, Zhang X, Li M Nat Plants. 2019 Mar;5(3):273-281. doi: 10.1038/s41477-019-0380-5. Epub 2019 Mar , 8. PMID:30850819<ref>PMID:30850819</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6ijo" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 07:58, 20 March 2019

OCA — Wed, 20 Mar 2019 07:58:18 GMT

←Older revision		Revision as of 07:58, 20 March 2019
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6ijo is ~~ON HOLD until Paper Publication~~	+	==Photosystem of green alga==
-		+	<StructureSection load='6ijo' size='340' side='right'caption='[[6ijo]], [[Resolution\|resolution]] 3.30Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6ijo]] is a 23 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IJO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IJO FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=LMU:DODECYL-ALPHA-D-MALTOSIDE'>LMU</scene>, <scene name='pdbligand=LUT:(3R,3R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>LUT</scene>, <scene name='pdbligand=NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL'>NEX</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=XAT:(3S,5R,6S,3S,5R,6S)-5,6,5,6-DIEPOXY-5,6,5,6-+TETRAHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>XAT</scene></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ijo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ijo OCA], [http://pdbe.org/6ijo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ijo RCSB], [http://www.ebi.ac.uk/pdbsum/6ijo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ijo ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Chlamydomonas reinhardtii]]
		+	[[Category: Large Structures]]
		+	[[Category: Li, M]]
		+	[[Category: Liu, Z]]
		+	[[Category: Ma, J]]
		+	[[Category: Pan, X]]
		+	[[Category: Su, X]]
		+	[[Category: Zhang, X]]
		+	[[Category: Antenna]]
		+	[[Category: Green alga]]
		+	[[Category: Photosynthesis]]
		+	[[Category: Photosystem]]
		+	[[Category: Supercomplex]]

OCA at 05:06, 5 December 2018

OCA — Wed, 05 Dec 2018 05:06:06 GMT

←Older revision		Revision as of 05:06, 5 December 2018
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6ijo is ON HOLD	+	The entry 6ijo is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "6ijo" [edit=sysop:move=sysop]

OCA — Wed, 17 Oct 2018 06:27:48 GMT

Protected "6ijo" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:27, 17 October 2018

OCA: New page: '''Unreleased structure''' The entry 6ijo is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 17 Oct 2018 06:27:46 GMT

New page: '''Unreleased structure''' The entry 6ijo is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6ijo is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]