6lng - Revision history

OCA at 11:03, 22 November 2023

OCA — Wed, 22 Nov 2023 11:03:59 GMT

←Older revision		Revision as of 11:03, 22 November 2023
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	<StructureSection load='6lng' size='340' side='right'caption='[[6lng]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='6lng' size='340' side='right'caption='[[6lng]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6lng]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~As_4.1583 As 4.1583~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LNG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6LNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6lng]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6LNG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8000015Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lng OCA], [~~http~~://pdbe.org/6lng PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6lng RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6lng PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6lng ProSAT]</span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lng OCA], [https://pdbe.org/6lng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6lng RCSB], [https://www.ebi.ac.uk/pdbsum/6lng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6lng ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV]] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).	+	[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</div>		</div>
	<div class="pdbe-citations 6lng" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 6lng" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Avidin 3D structures\|Avidin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: As 4 1583]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Adachi, M]]	+	[[Category: Streptomyces avidinii]]
-	[[Category: Kuroki, R]]	+	[[Category: Adachi M]]
-	[[Category: Minamihata, K]]	+	[[Category: Kuroki R]]
-	[[Category: Mishina, M]]	+	[[Category: Minamihata K]]
-	[[Category: Nagamune, T]]	+	[[Category: Mishina M]]
-	[[Category: Shimizu, R]]	+	[[Category: Nagamune T]]
-	[[Category: Tsukamoto, K]]	+	[[Category: Shimizu R]]
-	~~[[Category: Biotin-binding protein]]~~	+	[[Category: Tsukamoto K]]
-	~~[[Category: Peptide binding protein~~]]	+

OCA at 07:12, 15 April 2020

OCA — Wed, 15 Apr 2020 07:12:40 GMT

←Older revision		Revision as of 07:12, 15 April 2020
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	<StructureSection load='6lng' size='340' side='right'caption='[[6lng]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='6lng' size='340' side='right'caption='[[6lng]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6lng]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LNG OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6LNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6lng]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/As_4.1583 As 4.1583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LNG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LNG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lng OCA], [http://pdbe.org/6lng PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lng RCSB], [http://www.ebi.ac.uk/pdbsum/6lng PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lng ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lng OCA], [http://pdbe.org/6lng PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lng RCSB], [http://www.ebi.ac.uk/pdbsum/6lng PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lng ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: As 4 1583]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Adachi, M]]		[[Category: Adachi, M]]

OCA at 09:41, 18 March 2020

OCA — Wed, 18 Mar 2020 09:41:19 GMT

←Older revision		Revision as of 09:41, 18 March 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 6lng is ~~ON HOLD until Paper~~ Publication	+	==Rapid crystallization of streptavidin using charged peptides==
		+	<StructureSection load='6lng' size='340' side='right'caption='[[6lng]], [[Resolution\|resolution]] 1.80Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[6lng]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6LNG FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lng OCA], [http://pdbe.org/6lng PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lng RCSB], [http://www.ebi.ac.uk/pdbsum/6lng PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lng ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV]] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	We utilized electrostatic interaction to induce rapid crystallization of streptavidin. Simply mixing streptavidins possessing either a positively or negatively charged peptide at their C-terminus generated diffraction-quality crystals in a few hours. We modified the streptavidin crystals with fluorescent molecules using biotin, demonstrating the concept of protein crystals as functional biomaterials.

-	~~Authors: Minamihata~~, K., Tsukamoto, K., Adachi, M., Shimizu, R., Mishina, M., Kuroki, R., Nagamune, T.	+	Genetically fused charged peptides induce rapid crystallization of proteins.,Minamihata K, Tsukamoto K, Adachi M, Shimizu R, Mishina M, Kuroki R, Nagamune T Chem Commun (Camb). 2020 Mar 5. doi: 10.1039/c9cc09529b. PMID:32134050<ref>PMID:32134050</ref>

-	~~Description: Rapid crystallization~~ of ~~streptavidin using charged peptides~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[Category: Unreleased Structures]]~~	+	</div>
-	~~[[Category~~: ~~Tsukamoto, K]]~~	+	<div class="pdbe-citations 6lng" style="background-color:#fffaf0;"></div>
-	~~[[Category: Mishina, M]]~~	+	== References ==
-	~~[[Category: Minamihata, K]]~~	+	<references/>
-	~~[[Category: Kuroki, R]]~~	+	__TOC__
-	[[Category: ~~Shimizu, R~~]]	+	</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Adachi, M]]		[[Category: Adachi, M]]
		+	[[Category: Kuroki, R]]
		+	[[Category: Minamihata, K]]
		+	[[Category: Mishina, M]]
	[[Category: Nagamune, T]]		[[Category: Nagamune, T]]
		+	[[Category: Shimizu, R]]
		+	[[Category: Tsukamoto, K]]
		+	[[Category: Biotin-binding protein]]
		+	[[Category: Peptide binding protein]]

OCA at 12:59, 29 January 2020

OCA — Wed, 29 Jan 2020 12:59:08 GMT

←Older revision		Revision as of 12:59, 29 January 2020
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6lng is ON HOLD	+	The entry 6lng is ON HOLD until Paper Publication

	Authors: Minamihata, K., Tsukamoto, K., Adachi, M., Shimizu, R., Mishina, M., Kuroki, R., Nagamune, T.		Authors: Minamihata, K., Tsukamoto, K., Adachi, M., Shimizu, R., Mishina, M., Kuroki, R., Nagamune, T.
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	Description: Rapid crystallization of streptavidin using charged peptides		Description: Rapid crystallization of streptavidin using charged peptides
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Mishina, M]]
-	[[Category: Kuroki, R]]
-	[[Category: Nagamune, T]]
	[[Category: Tsukamoto, K]]		[[Category: Tsukamoto, K]]
		+	[[Category: Mishina, M]]
	[[Category: Minamihata, K]]		[[Category: Minamihata, K]]
		+	[[Category: Kuroki, R]]
	[[Category: Shimizu, R]]		[[Category: Shimizu, R]]
	[[Category: Adachi, M]]		[[Category: Adachi, M]]
		+	[[Category: Nagamune, T]]

OCA: Protected "6lng" [edit=sysop:move=sysop]

OCA — Wed, 08 Jan 2020 05:56:55 GMT

Protected "6lng" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:56, 8 January 2020

OCA: New page: '''Unreleased structure''' The entry 6lng is ON HOLD Authors: Minamihata, K., Tsukamoto, K., Adachi, M., Shimizu, R., Mishina, M., Kuroki, R., Nagamune, T. Description: Rapid crystalli...

OCA — Wed, 08 Jan 2020 05:56:53 GMT

New page: '''Unreleased structure''' The entry 6lng is ON HOLD Authors: Minamihata, K., Tsukamoto, K., Adachi, M., Shimizu, R., Mishina, M., Kuroki, R., Nagamune, T. Description: Rapid crystalli...

New page

'''Unreleased structure'''

The entry 6lng is ON HOLD

Authors: Minamihata, K., Tsukamoto, K., Adachi, M., Shimizu, R., Mishina, M., Kuroki, R., Nagamune, T.

Description: Rapid crystallization of streptavidin using charged peptides
[[Category: Unreleased Structures]]
[[Category: Mishina, M]]
[[Category: Kuroki, R]]
[[Category: Nagamune, T]]
[[Category: Tsukamoto, K]]
[[Category: Minamihata, K]]
[[Category: Shimizu, R]]
[[Category: Adachi, M]]