6mij - Revision history

OCA at 06:32, 11 October 2023

OCA — Wed, 11 Oct 2023 06:32:28 GMT

←Older revision		Revision as of 06:32, 11 October 2023
Line 3:		Line 3:
	<StructureSection load='6mij' size='340' side='right'caption='[[6mij]], [[Resolution\|resolution]] 1.96Å' scene=''>		<StructureSection load='6mij' size='340' side='right'caption='[[6mij]], [[Resolution\|resolution]] 1.96Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6mij]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Acib2 Acib2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MIJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6MIJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6mij]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_ATCC_19606_=_CIP_70.34_=_JCM_6841 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MIJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MIJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.955Å</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, BIT33_08905, BIT33_16145 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=575584 ACIB2])</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6mij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mij OCA], [~~http~~://pdbe.org/6mij PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6mij RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6mij PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6mij ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mij OCA], [https://pdbe.org/6mij PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mij RCSB], [https://www.ebi.ac.uk/pdbsum/6mij PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mij ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~N9JNN0_ACIB2 N9JNN0_ACIB2~~]~~] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.~~[~~HAMAP-Rule~~:~~MF_00118~~]	+	[https://www.uniprot.org/uniprot/D0CG85_ACIB2 D0CG85_ACIB2] [https://www.uniprot.org/uniprot/D0C9P9_ACIB2 D0C9P9_ACIB2]

	==See Also==		==See Also==
Line 15:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Acib2~~]]	+	[[Category: Acinetobacter baumannii ATCC 19606 = CIP 70 34 = JCM 6841]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Structural genomic~~]]	+	[[Category: Di Leo R]]
-	[[Category: Evdokimova, E]]	+	[[Category: Evdokimova E]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	~~[[Category: Leo, R Di~~]]	+	[[Category: Satchell KJF]]
-	[[Category: Satchell~~, K J.F~~]]	+	[[Category: Savchenko A]]
-	[[Category: Savchenko, A]]	+	[[Category: Stogios PJ]]
-	[[Category: Stogios~~, P J~~]]	+	[[Category: Tan K]]
-	[[Category: Tan, K]]	+
-	~~[[Category: Csgid]]~~	+
-	~~[[Category: G protein]]~~	+
-	~~[[Category: Gdp]]~~	+
-	~~[[Category: Gtp binding]]~~	+
-	~~[[Category: Gtpase]]~~	+
-	~~[[Category: Magnesium]]~~	+
-	~~[[Category: National institute of allergy and infectious disease]]~~	+
-	~~[[Category: Translation]]~~	+
-	~~[[Category: Translation elongation factor~~]]	+

OCA at 05:46, 13 May 2020

OCA — Wed, 13 May 2020 05:46:59 GMT

←Older revision		Revision as of 05:46, 13 May 2020
Line 3:		Line 3:
	<StructureSection load='6mij' size='340' side='right'caption='[[6mij]], [[Resolution\|resolution]] 1.96Å' scene=''>		<StructureSection load='6mij' size='340' side='right'caption='[[6mij]], [[Resolution\|resolution]] 1.96Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6mij]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acib2 Acib2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MIJ OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6MIJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6mij]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acib2 Acib2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MIJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6MIJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, BIT33_08905, BIT33_16145 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=575584 ACIB2])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, BIT33_08905, BIT33_16145 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=575584 ACIB2])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6mij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mij OCA], [http://pdbe.org/6mij PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mij RCSB], [http://www.ebi.ac.uk/pdbsum/6mij PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mij ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6mij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mij OCA], [http://pdbe.org/6mij PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mij RCSB], [http://www.ebi.ac.uk/pdbsum/6mij PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mij ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 19:		Line 19:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Evdokimova, E]]		[[Category: Evdokimova, E]]
-	[[Category: Joachimiak, A J]]	+	[[Category: Joachimiak, A]]
	[[Category: Leo, R Di]]		[[Category: Leo, R Di]]
	[[Category: Satchell, K J.F]]		[[Category: Satchell, K J.F]]

OCA at 10:57, 18 December 2019

OCA — Wed, 18 Dec 2019 10:57:44 GMT

←Older revision		Revision as of 10:57, 18 December 2019
Line 1:		Line 1:

	==Crystal structure of EF-Tu from Acinetobacter baumannii in complex with Mg2+ and GDP==		==Crystal structure of EF-Tu from Acinetobacter baumannii in complex with Mg2+ and GDP==
-	<StructureSection load='6mij' size='340' side='right' caption='[[6mij]], [[Resolution\|resolution]] 1.96Å' scene=''>	+	<StructureSection load='6mij' size='340' side='right'caption='[[6mij]], [[Resolution\|resolution]] 1.96Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6mij]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MIJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MIJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6mij]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acib2 Acib2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MIJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MIJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, BIT33_08905, BIT33_16145 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=575584 ACIB2])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6mij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mij OCA], [http://pdbe.org/6mij PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mij RCSB], [http://www.ebi.ac.uk/pdbsum/6mij PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mij ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6mij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mij OCA], [http://pdbe.org/6mij PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mij RCSB], [http://www.ebi.ac.uk/pdbsum/6mij PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mij ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/N9JNN0_ACIB2 N9JNN0_ACIB2]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.[HAMAP-Rule:MF_00118]		[[http://www.uniprot.org/uniprot/N9JNN0_ACIB2 N9JNN0_ACIB2]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.[HAMAP-Rule:MF_00118]
		+
		+	==See Also==
		+	*[[Elongation factor 3D structures\|Elongation factor 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Acib2]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Evdokimova, E]]		[[Category: Evdokimova, E]]

OCA at 07:56, 3 October 2018

OCA — Wed, 03 Oct 2018 07:56:47 GMT

←Older revision		Revision as of 07:56, 3 October 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6mij ~~is ON HOLD~~	+	==Crystal structure of EF-Tu from Acinetobacter baumannii in complex with Mg2+ and GDP==
-		+	<StructureSection load='6mij' size='340' side='right' caption='[[6mij]], [[Resolution\|resolution]] 1.96Å' scene=''>
-	~~Authors~~: ~~Stogios, P~~.J.~~, Evdokimova, E~~., ~~Tan~~, K., ~~Di Leo, R~~., ~~Savchenko, A~~., ~~Satchell, K~~.J.F., ~~Joachimiak, A~~.J., ~~Center for Structural Genomics of Infectious Diseases (CSGID)~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6mij]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MIJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MIJ FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure~~ of EF-~~Tu from Acinetobacter baumannii in complex with Mg2+ and GDP~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6mij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mij OCA], [http://pdbe.org/6mij PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mij RCSB], [http://www.ebi.ac.uk/pdbsum/6mij PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mij ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/N9JNN0_ACIB2 N9JNN0_ACIB2]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.[HAMAP-Rule:MF_00118]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Structural genomic]]
		+	[[Category: Evdokimova, E]]
		+	[[Category: Joachimiak, A J]]
		+	[[Category: Leo, R Di]]
		+	[[Category: Satchell, K J.F]]
	[[Category: Savchenko, A]]		[[Category: Savchenko, A]]
-	~~[[Category: Joachimiak, A.J]]~~	+	[[Category: Stogios, P J]]
-	[[Category: Stogios, P.J]]	+
-	~~[[Category: Satchell, K.J.F]]~~	+
-	~~[[Category: Di Leo, R~~]]	+
	[[Category: Tan, K]]		[[Category: Tan, K]]
-	[[Category: ~~Center For Structural Genomics Of Infectious Diseases (~~Csgid)]]	+	[[Category: Csgid]]
-	[[Category: ~~Evdokimova, E~~]]	+	[[Category: G protein]]
		+	[[Category: Gdp]]
		+	[[Category: Gtp binding]]
		+	[[Category: Gtpase]]
		+	[[Category: Magnesium]]
		+	[[Category: National institute of allergy and infectious disease]]
		+	[[Category: Translation]]
		+	[[Category: Translation elongation factor]]

OCA: Protected "6mij" [edit=sysop:move=sysop]

OCA — Wed, 26 Sep 2018 06:35:46 GMT

Protected "6mij" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:35, 26 September 2018

OCA: New page: '''Unreleased structure''' The entry 6mij is ON HOLD Authors: Stogios, P.J., Evdokimova, E., Tan, K., Di Leo, R., Savchenko, A., Satchell, K.J.F., Joachimiak, A.J., Center for Structura...

OCA — Wed, 26 Sep 2018 06:35:45 GMT

New page: '''Unreleased structure''' The entry 6mij is ON HOLD Authors: Stogios, P.J., Evdokimova, E., Tan, K., Di Leo, R., Savchenko, A., Satchell, K.J.F., Joachimiak, A.J., Center for Structura...

New page

'''Unreleased structure'''

The entry 6mij is ON HOLD

Authors: Stogios, P.J., Evdokimova, E., Tan, K., Di Leo, R., Savchenko, A., Satchell, K.J.F., Joachimiak, A.J., Center for Structural Genomics of Infectious Diseases (CSGID)

Description: Crystal structure of EF-Tu from Acinetobacter baumannii in complex with Mg2+ and GDP
[[Category: Unreleased Structures]]
[[Category: Savchenko, A]]
[[Category: Joachimiak, A.J]]
[[Category: Stogios, P.J]]
[[Category: Satchell, K.J.F]]
[[Category: Di Leo, R]]
[[Category: Tan, K]]
[[Category: Center For Structural Genomics Of Infectious Diseases (Csgid)]]
[[Category: Evdokimova, E]]