6nhu - Revision history

OCA at 06:54, 11 October 2023

OCA — Wed, 11 Oct 2023 06:54:03 GMT

←Older revision		Revision as of 06:54, 11 October 2023
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	<StructureSection load='6nhu' size='340' side='right'caption='[[6nhu]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='6nhu' size='340' side='right'caption='[[6nhu]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6nhu]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Agrfc Agrfc~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NHU OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6NHU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6nhu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NHU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6NHU FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=EDO:1~~,2~~-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~Atu0933 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=176299 AGRFC])</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6]~~ </~~span~~></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6nhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nhu OCA], [https://pdbe.org/6nhu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6nhu RCSB], [https://www.ebi.ac.uk/pdbsum/6nhu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6nhu ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6nhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nhu OCA], [~~http~~://pdbe.org/6nhu PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6nhu RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6nhu PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6nhu ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q7D0B8_AGRFC Q7D0B8_AGRFC]

	==See Also==		==See Also==
Line 14:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Agrfc]]~~	+	[[Category: Agrobacterium fabrum str. C58]]
-	~~[[Category: Beta-lactamase~~]]	+
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Babnigg, G]]	+	[[Category: Babnigg G]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Endres M]]
-	[[Category: Endres, M]]	+	[[Category: Joachimiak A]]
-	[[Category: Joachimiak, A]]	+	[[Category: Kim Y]]
-	[[Category: Kim, Y]]	+	[[Category: Welk L]]
-	[[Category: Welk, L]]	+
-	~~[[Category: Beta lactamase class d]]~~	+
-	~~[[Category: Csgid]]~~	+
-	~~[[Category: Hydrolase~~]]	+

OCA at 11:32, 18 December 2019

OCA — Wed, 18 Dec 2019 11:32:09 GMT

←Older revision		Revision as of 11:32, 18 December 2019
Line 1:		Line 1:

	==Crystal Structure of the Beta Lactamase Class D YbxI from Agrobacterium fabrum==		==Crystal Structure of the Beta Lactamase Class D YbxI from Agrobacterium fabrum==
-	<StructureSection load='6nhu' size='340' side='right' caption='[[6nhu]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='6nhu' size='340' side='right'caption='[[6nhu]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6nhu]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NHU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6NHU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6nhu]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NHU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6NHU FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Atu0933 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6nhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nhu OCA], [http://pdbe.org/6nhu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6nhu RCSB], [http://www.ebi.ac.uk/pdbsum/6nhu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6nhu ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6nhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nhu OCA], [http://pdbe.org/6nhu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6nhu RCSB], [http://www.ebi.ac.uk/pdbsum/6nhu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6nhu ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Beta-lactamase 3D structures\|Beta-lactamase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Agrfc]]
	[[Category: Beta-lactamase]]		[[Category: Beta-lactamase]]
		+	[[Category: Large Structures]]
	[[Category: Babnigg, G]]		[[Category: Babnigg, G]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 12:16, 16 January 2019

OCA — Wed, 16 Jan 2019 12:16:11 GMT

←Older revision		Revision as of 12:16, 16 January 2019
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 6nhu is ON HOLD~~	+	==Crystal Structure of the Beta Lactamase Class D YbxI from Agrobacterium fabrum==
-		+	<StructureSection load='6nhu' size='340' side='right' caption='[[6nhu]], [[Resolution\|resolution]] 2.30Å' scene=''>
-	~~Authors: Kim, Y., Welk, L., Endres, M., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6nhu]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NHU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6NHU FirstGlance]. <br>
-	~~Description:~~ Crystal Structure of the Beta Lactamase Class D YbxI from Agrobacterium fabrum	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
-	[[~~Category~~: ~~Welk~~, L]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6nhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nhu OCA], [http://pdbe.org/6nhu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6nhu RCSB], [http://www.ebi.ac.uk/pdbsum/6nhu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6nhu ProSAT]</span></td></tr>
-	[[Category: ~~Center For Structural Genomics Of Infectious Diseases (Csgid)~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Beta-lactamase]]
	[[Category: Babnigg, G]]		[[Category: Babnigg, G]]
		+	[[Category: Structural genomic]]
		+	[[Category: Endres, M]]
		+	[[Category: Joachimiak, A]]
	[[Category: Kim, Y]]		[[Category: Kim, Y]]
-	[[Category: ~~Joachimiak~~, A]]	+	[[Category: Welk, L]]
-	[[Category: ~~Endres, M~~]]	+	[[Category: Beta lactamase class d]]
		+	[[Category: Csgid]]
		+	[[Category: Hydrolase]]

OCA: Protected "6nhu" [edit=sysop:move=sysop]

OCA — Wed, 02 Jan 2019 04:58:36 GMT

Protected "6nhu" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:58, 2 January 2019

OCA: New page: '''Unreleased structure''' The entry 6nhu is ON HOLD Authors: Kim, Y., Welk, L., Endres, M., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID) ...

OCA — Wed, 02 Jan 2019 04:58:35 GMT

New page: '''Unreleased structure''' The entry 6nhu is ON HOLD Authors: Kim, Y., Welk, L., Endres, M., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID) ...

New page

'''Unreleased structure'''

The entry 6nhu is ON HOLD

Authors: Kim, Y., Welk, L., Endres, M., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Description: Crystal Structure of the Beta Lactamase Class D YbxI from Agrobacterium fabrum
[[Category: Unreleased Structures]]
[[Category: Welk, L]]
[[Category: Center For Structural Genomics Of Infectious Diseases (Csgid)]]
[[Category: Babnigg, G]]
[[Category: Kim, Y]]
[[Category: Joachimiak, A]]
[[Category: Endres, M]]