6oct - Revision history

OCA at 07:08, 11 October 2023

OCA — Wed, 11 Oct 2023 07:08:18 GMT

←Older revision		Revision as of 07:08, 11 October 2023
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	<StructureSection load='6oct' size='340' side='right'caption='[[6oct]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='6oct' size='340' side='right'caption='[[6oct]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6oct]] is a 10 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OCT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6OCT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6oct]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OCT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OCT FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~KCTD16~~, ~~KIAA1317 (~~[~~http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=9606 HUMAN])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.8Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6oct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oct OCA], [~~http~~://pdbe.org/6oct PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6oct RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6oct PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6oct ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6oct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oct OCA], [https://pdbe.org/6oct PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6oct RCSB], [https://www.ebi.ac.uk/pdbsum/6oct PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6oct ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/KCD16_HUMAN KCD16_HUMAN]] Auxiliary subunit of GABA-B receptors that determine the pharmacology and kinetics of the receptor response. Increases agonist potency and markedly alter the G-protein signaling of the receptors by accelerating onset and promoting desensitization (By similarity).	+	[https://www.uniprot.org/uniprot/KCD16_HUMAN KCD16_HUMAN] Auxiliary subunit of GABA-B receptors that determine the pharmacology and kinetics of the receptor response. Increases agonist potency and markedly alter the G-protein signaling of the receptors by accelerating onset and promoting desensitization (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Fan~~, Q R~~]]	+	[[Category: Fan QR]]
-	[[Category: Frangaj, A]]	+	[[Category: Frangaj A]]
-	[[Category: Geng, Y]]	+	[[Category: Geng Y]]
-	[[Category: Glaaser, I]]	+	[[Category: Glaaser I]]
-	[[Category: Kurinov, I]]	+	[[Category: Kurinov I]]
-	[[Category: Liu, J]]	+	[[Category: Liu J]]
-	[[Category: McDonald, P]]	+	[[Category: McDonald P]]
-	[[Category: Mosyak, L]]	+	[[Category: Mosyak L]]
-	[[Category: Park, J]]	+	[[Category: Park J]]
-	[[Category: Slesinger~~, P A~~]]	+	[[Category: Slesinger PA]]
-	[[Category: Sturchler, E]]	+	[[Category: Sturchler E]]
-	[[Category: Wang, H]]	+	[[Category: Wang H]]
-	[[Category: Zhao, Y]]	+	[[Category: Zhao Y]]
-	[[Category: Zhou, M]]	+	[[Category: Zhou M]]
-	[[Category: Zuo, H]]	+	[[Category: Zuo H]]
-	~~[[Category: Kctd16]]~~	+
-	~~[[Category: Pentamer]]~~	+
-	~~[[Category: Signaling protein~~]]	+

OCA at 08:21, 24 April 2019

OCA — Wed, 24 Apr 2019 08:21:48 GMT

←Older revision		Revision as of 08:21, 24 April 2019
Line 3:		Line 3:
	<StructureSection load='6oct' size='340' side='right'caption='[[6oct]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='6oct' size='340' side='right'caption='[[6oct]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6oct]] is a 10 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OCT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6oct]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OCT FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6oct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oct OCA], [http://pdbe.org/6oct PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6oct RCSB], [http://www.ebi.ac.uk/pdbsum/6oct PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6oct ProSAT]</span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">KCTD16, KIAA1317 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6oct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oct OCA], [http://pdbe.org/6oct PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6oct RCSB], [http://www.ebi.ac.uk/pdbsum/6oct PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6oct ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/KCD16_HUMAN KCD16_HUMAN]] Auxiliary subunit of GABA-B receptors that determine the pharmacology and kinetics of the receptor response. Increases agonist potency and markedly alter the G-protein signaling of the receptors by accelerating onset and promoting desensitization (By similarity).		[[http://www.uniprot.org/uniprot/KCD16_HUMAN KCD16_HUMAN]] Auxiliary subunit of GABA-B receptors that determine the pharmacology and kinetics of the receptor response. Increases agonist potency and markedly alter the G-protein signaling of the receptors by accelerating onset and promoting desensitization (By similarity).
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Metabotropic GABAB receptors mediate a significant fraction of inhibitory neurotransmission in the brain. Native GABAB receptor complexes contain the principal subunits GABAB1 and GABAB2, which form an obligate heterodimer, and auxiliary subunits, known as potassium channel tetramerization domain-containing proteins (KCTDs). KCTDs interact with GABAB receptors and modify the kinetics of GABAB receptor signaling. Little is known about the molecular mechanism governing the direct association and functional coupling of GABAB receptors with these auxiliary proteins. Here, we describe the high-resolution structure of the KCTD16 oligomerization domain in complex with part of the GABAB2 receptor. A single GABAB2 C-terminal peptide is bound to the interior of an open pentamer formed by the oligomerization domain of five KCTD16 subunits. Mutation of specific amino acids identified in the structure of the GABAB2-KCTD16 interface disrupted both the biochemical association and functional modulation of GABAB receptors and G protein-activated inwardly rectifying K(+) channel (GIRK) channels. These interfacial residues are conserved among KCTDs, suggesting a common mode of KCTD interaction with GABAB receptors. Defining the binding interface of GABAB receptor and KCTD reveals a potential regulatory site for modulating GABAB-receptor function in the brain.
		+
		+	Structural basis for auxiliary subunit KCTD16 regulation of the GABAB receptor.,Zuo H, Glaaser I, Zhao Y, Kurinov I, Mosyak L, Wang H, Liu J, Park J, Frangaj A, Sturchler E, Zhou M, McDonald P, Geng Y, Slesinger PA, Fan QR Proc Natl Acad Sci U S A. 2019 Apr 10. pii: 1903024116. doi:, 10.1073/pnas.1903024116. PMID:30971491<ref>PMID:30971491</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6oct" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Human]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Fan, Q R]]		[[Category: Fan, Q R]]

OCA at 07:29, 10 April 2019

OCA — Wed, 10 Apr 2019 07:29:26 GMT

←Older revision		Revision as of 07:29, 10 April 2019
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6oct ~~is ON HOLD~~	+	==Crystal structure of human KCTD16 T1 domain==
-		+	<StructureSection load='6oct' size='340' side='right'caption='[[6oct]], [[Resolution\|resolution]] 2.80Å' scene=''>
-	~~Authors~~: ~~Zuo, H~~.~~, Glaaser, I~~.~~, Zhao, Y~~.~~, Kurinov, I~~.~~, Mosyak, L~~.~~, Wang, H~~.~~, Liu, J~~.~~, Park, J~~.~~, Frangaj, A~~.~~, Sturchler, E~~., ~~Zhou, M~~., ~~McDonald, P~~., ~~Geng, Y~~., ~~Slesinger, P~~.A., ~~Fan, Q~~.R.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6oct]] is a 10 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OCT FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure~~ of ~~human KCTD16 T1 domain~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6oct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oct OCA], [http://pdbe.org/6oct PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6oct RCSB], [http://www.ebi.ac.uk/pdbsum/6oct PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6oct ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/KCD16_HUMAN KCD16_HUMAN]] Auxiliary subunit of GABA-B receptors that determine the pharmacology and kinetics of the receptor response. Increases agonist potency and markedly alter the G-protein signaling of the receptors by accelerating onset and promoting desensitization (By similarity).
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Fan, Q R]]
	[[Category: Frangaj, A]]		[[Category: Frangaj, A]]
-	[[Category: ~~Mcdonald~~, P]]	+	[[Category: Geng, Y]]
-	[[Category: ~~Fan~~, ~~Q.R~~]]	+	[[Category: Glaaser, I]]
		+	[[Category: Kurinov, I]]
		+	[[Category: Liu, J]]
		+	[[Category: McDonald, P]]
		+	[[Category: Mosyak, L]]
	[[Category: Park, J]]		[[Category: Park, J]]
-	[[Category: ~~Mosyak~~, L]]	+	[[Category: Slesinger, P A]]
-	[[Category: ~~Liu~~, J]]	+	[[Category: Sturchler, E]]
	[[Category: Wang, H]]		[[Category: Wang, H]]
		+	[[Category: Zhao, Y]]
		+	[[Category: Zhou, M]]
	[[Category: Zuo, H]]		[[Category: Zuo, H]]
-	[[Category: ~~Slesinger, P.A~~]]	+	[[Category: Kctd16]]
-	[[Category: ~~Zhou, M~~]]	+	[[Category: Pentamer]]
-	[[Category: ~~Zhao, Y]]~~	+	[[Category: Signaling protein]]
-	~~[[Category: Glaaser, I]]~~	+
-	~~[[Category: Kurinov, I]]~~	+
-	~~[[Category: Geng, Y]]~~	+
-	~~[[Category: Sturchler, E~~]]	+

OCA: Protected "6oct" [edit=sysop:move=sysop]

OCA — Wed, 03 Apr 2019 04:40:57 GMT

Protected "6oct" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:40, 3 April 2019

OCA: New page: '''Unreleased structure''' The entry 6oct is ON HOLD Authors: Zuo, H., Glaaser, I., Zhao, Y., Kurinov, I., Mosyak, L., Wang, H., Liu, J., Park, J., Frangaj, A., Sturchler, E., Zhou, M.,...

OCA — Wed, 03 Apr 2019 04:40:55 GMT

New page: '''Unreleased structure''' The entry 6oct is ON HOLD Authors: Zuo, H., Glaaser, I., Zhao, Y., Kurinov, I., Mosyak, L., Wang, H., Liu, J., Park, J., Frangaj, A., Sturchler, E., Zhou, M.,...

New page

'''Unreleased structure'''

The entry 6oct is ON HOLD

Authors: Zuo, H., Glaaser, I., Zhao, Y., Kurinov, I., Mosyak, L., Wang, H., Liu, J., Park, J., Frangaj, A., Sturchler, E., Zhou, M., McDonald, P., Geng, Y., Slesinger, P.A., Fan, Q.R.

Description: Crystal structure of human KCTD16 T1 domain
[[Category: Unreleased Structures]]
[[Category: Frangaj, A]]
[[Category: Mcdonald, P]]
[[Category: Fan, Q.R]]
[[Category: Park, J]]
[[Category: Mosyak, L]]
[[Category: Liu, J]]
[[Category: Wang, H]]
[[Category: Zuo, H]]
[[Category: Slesinger, P.A]]
[[Category: Zhou, M]]
[[Category: Zhao, Y]]
[[Category: Glaaser, I]]
[[Category: Kurinov, I]]
[[Category: Geng, Y]]
[[Category: Sturchler, E]]