6p20 - Revision history

OCA at 07:21, 11 October 2023

OCA — Wed, 11 Oct 2023 07:21:48 GMT

←Older revision		Revision as of 07:21, 11 October 2023
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	==Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164==		==Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164==
-	<StructureSection load='6p20' size='340' side='right'caption='[[6p20]]' scene=''>	+	<StructureSection load='6p20' size='340' side='right'caption='[[6p20]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P20 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6P20 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6p20]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4] and [https://en.wikipedia.org/wiki/Pseudomonas_virus_phiKZ Pseudomonas virus phiKZ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P20 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6P20 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6p20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p20 OCA], [~~http~~://pdbe.org/6p20 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6p20 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6p20 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6p20 ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.749Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ELA:9-OCTADECENOIC+ACID'>ELA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6p20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p20 OCA], [https://pdbe.org/6p20 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6p20 RCSB], [https://www.ebi.ac.uk/pdbsum/6p20 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6p20 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q8SCZ8_BPDPK Q8SCZ8_BPDPK] [https://www.uniprot.org/uniprot/NEEDL_BPT4 NEEDL_BPT4] Tail-associated lysozyme of the baseplate hub that is essential for localized hydrolysis of bacterial cell wall necessary for viral DNA injection. The needle-like gp5 protein punctures the outer cell membrane and then digests the peptidoglycan cell wall in the periplasmic space. Involved in the tail assembly.<ref>PMID:12837775</ref> <ref>PMID:21129200</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Escherichia virus T4]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Pseudomonas virus phiKZ]]
	[[Category: Buth SA]]		[[Category: Buth SA]]
	[[Category: Leiman PG]]		[[Category: Leiman PG]]
	[[Category: Shneider MM]]		[[Category: Shneider MM]]

OCA at 06:54, 27 May 2020

OCA — Wed, 27 May 2020 06:54:44 GMT

←Older revision		Revision as of 06:54, 27 May 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 6p20 is ~~ON HOLD until Paper Publication~~	+	==Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164==
-		+	<StructureSection load='6p20' size='340' side='right'caption='[[6p20]]' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P20 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6P20 FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6p20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p20 OCA], [http://pdbe.org/6p20 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6p20 RCSB], [http://www.ebi.ac.uk/pdbsum/6p20 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6p20 ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Buth SA]]
		+	[[Category: Leiman PG]]
		+	[[Category: Shneider MM]]

OCA at 08:53, 17 July 2019

OCA — Wed, 17 Jul 2019 08:53:39 GMT

←Older revision		Revision as of 08:53, 17 July 2019
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6p20 is ON HOLD	+	The entry 6p20 is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "6p20" [edit=sysop:move=sysop]

OCA — Wed, 29 May 2019 04:36:30 GMT

Protected "6p20" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:36, 29 May 2019

OCA: New page: '''Unreleased structure''' The entry 6p20 is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 29 May 2019 04:36:29 GMT

New page: '''Unreleased structure''' The entry 6p20 is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6p20 is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]