6qy6 - Revision history

OCA at 12:10, 24 January 2024

OCA — Wed, 24 Jan 2024 12:10:57 GMT

←Older revision		Revision as of 12:10, 24 January 2024
Line 3:		Line 3:
	<StructureSection load='6qy6' size='340' side='right'caption='[[6qy6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='6qy6' size='340' side='right'caption='[[6qy6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6qy6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Dsm_24743 Dsm 24743~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QY6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6qy6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Planococcus_halocryophilus Planococcus halocryophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QY6 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>~~, ~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~BBI08_05760 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=1215089 DSM 24743])</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qy6 OCA], [https://pdbe.org/6qy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qy6 RCSB], [https://www.ebi.ac.uk/pdbsum/6qy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qy6 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qy6 OCA], [https://pdbe.org/6qy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qy6 RCSB], [https://www.ebi.ac.uk/pdbsum/6qy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qy6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/A0A1C7DQ98_9BACL A0A1C7DQ98_9BACL]] Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.[SAAS:SAAS00711016]	+	[https://www.uniprot.org/uniprot/A0A1C7DQ98_9BACL A0A1C7DQ98_9BACL] Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.[SAAS:SAAS00711016]

	==See Also==		==See Also==
Line 16:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: CCA tRNA nucleotidyltransferase]]
-	[[Category: Dsm 24743]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Betat, H]]	+	[[Category: Planococcus halocryophilus]]
-	[[Category: Bluhm, A]]	+	[[Category: Betat H]]
-	[[Category: Hennig, O]]	+	[[Category: Bluhm A]]
-	[[Category: Lorber, B]]	+	[[Category: Hennig O]]
-	[[Category: Moerl, M]]	+	[[Category: Lorber B]]
-	[[Category: Rollet, K]]	+	[[Category: Moerl M]]
-	[[Category: Sauter, C]]	+	[[Category: Rollet K]]
-	[[Category: Wijn, R ~~de]]~~	+	[[Category: Sauter C]]
-	~~[[Category: Psychrophilic enzyme]]~~	+	[[Category: De Wijn R]]
-	~~[[Category: Rna binding protein]]~~	+
-	~~[[Category: Trna maturation]]~~	+
-	~~[[Category: Trna nucleotidyltransferase~~]]	+

OCA at 15:54, 3 November 2021

OCA — Wed, 03 Nov 2021 15:54:03 GMT

←Older revision		Revision as of 15:54, 3 November 2021
Line 3:		Line 3:
	<StructureSection load='6qy6' size='340' side='right'caption='[[6qy6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='6qy6' size='340' side='right'caption='[[6qy6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6qy6]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Dsm_24743 Dsm 24743]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QY6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6QY6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6qy6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dsm_24743 Dsm 24743]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QY6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BBI08_05760 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1215089 DSM 24743])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BBI08_05760 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1215089 DSM 24743])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qy6 OCA], [~~http~~://pdbe.org/6qy6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6qy6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6qy6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6qy6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qy6 OCA], [https://pdbe.org/6qy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qy6 RCSB], [https://www.ebi.ac.uk/pdbsum/6qy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qy6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/A0A1C7DQ98_9BACL A0A1C7DQ98_9BACL]] Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.[SAAS:SAAS00711016]	+	[[https://www.uniprot.org/uniprot/A0A1C7DQ98_9BACL A0A1C7DQ98_9BACL]] Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.[SAAS:SAAS00711016]
		+
		+	==See Also==
		+	*[[CCA-adding enzyme 3D structures\|CCA-adding enzyme 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:44, 16 December 2020

OCA — Wed, 16 Dec 2020 12:44:16 GMT

←Older revision		Revision as of 12:44, 16 December 2020
Line 1:		Line 1:

-	==Crystal structure of the CCA-adding enzyme of a psychrophilic organism ~~in complex with CTP~~==	+	==Crystal structure of the CCA-adding enzyme of a psychrophilic organism==
	<StructureSection load='6qy6' size='340' side='right'caption='[[6qy6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='6qy6' size='340' side='right'caption='[[6qy6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6qy6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QY6 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6QY6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6qy6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Dsm_24743 Dsm 24743]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QY6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6QY6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BBI08_05760 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1215089 DSM 24743])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qy6 OCA], [http://pdbe.org/6qy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qy6 RCSB], [http://www.ebi.ac.uk/pdbsum/6qy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qy6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qy6 OCA], [http://pdbe.org/6qy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qy6 RCSB], [http://www.ebi.ac.uk/pdbsum/6qy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qy6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	</StructureSection>		</StructureSection>
	[[Category: CCA tRNA nucleotidyltransferase]]		[[Category: CCA tRNA nucleotidyltransferase]]
		+	[[Category: Dsm 24743]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Betat, H]]		[[Category: Betat, H]]

OCA at 10:15, 27 March 2020

OCA — Fri, 27 Mar 2020 10:15:33 GMT

←Older revision		Revision as of 10:15, 27 March 2020
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6qy6 ~~is ON HOLD~~	+	==Crystal structure of the CCA-adding enzyme of a psychrophilic organism in complex with CTP==
-		+	<StructureSection load='6qy6' size='340' side='right'caption='[[6qy6]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~Authors~~: ~~de Wijn, R~~., ~~Rollet~~, K., ~~Bluhm, A~~., ~~Hennig, O~~., ~~Betat, H~~., ~~Moerl, M~~., ~~Lorber, B~~., ~~Sauter, C~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6qy6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6QY6 FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure~~ of the ~~CCA~~-~~adding enzyme of~~ a ~~psychrophilic organism~~ in ~~complex with~~ CTP	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qy6 OCA], [http://pdbe.org/6qy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qy6 RCSB], [http://www.ebi.ac.uk/pdbsum/6qy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qy6 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/A0A1C7DQ98_9BACL A0A1C7DQ98_9BACL]] Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.[SAAS:SAAS00711016]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: CCA tRNA nucleotidyltransferase]]
		+	[[Category: Large Structures]]
		+	[[Category: Betat, H]]
	[[Category: Bluhm, A]]		[[Category: Bluhm, A]]
		+	[[Category: Hennig, O]]
		+	[[Category: Lorber, B]]
	[[Category: Moerl, M]]		[[Category: Moerl, M]]
-	[[Category: Lorber, B]]
-	[[Category: Hennig, O]]
	[[Category: Rollet, K]]		[[Category: Rollet, K]]
	[[Category: Sauter, C]]		[[Category: Sauter, C]]
-	[[Category: ~~Betat~~, H]]	+	[[Category: Wijn, R de]]
-	[[Category: ~~De Wijn, R~~]]	+	[[Category: Psychrophilic enzyme]]
		+	[[Category: Rna binding protein]]
		+	[[Category: Trna maturation]]
		+	[[Category: Trna nucleotidyltransferase]]

OCA: Protected "6qy6" [edit=sysop:move=sysop]

OCA — Wed, 20 Mar 2019 06:07:59 GMT

Protected "6qy6" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:07, 20 March 2019

OCA: New page: '''Unreleased structure''' The entry 6qy6 is ON HOLD Authors: de Wijn, R., Rollet, K., Bluhm, A., Hennig, O., Betat, H., Moerl, M., Lorber, B., Sauter, C. Description: Crystal structur...

OCA — Wed, 20 Mar 2019 06:07:58 GMT

New page: '''Unreleased structure''' The entry 6qy6 is ON HOLD Authors: de Wijn, R., Rollet, K., Bluhm, A., Hennig, O., Betat, H., Moerl, M., Lorber, B., Sauter, C. Description: Crystal structur...

New page

'''Unreleased structure'''

The entry 6qy6 is ON HOLD

Authors: de Wijn, R., Rollet, K., Bluhm, A., Hennig, O., Betat, H., Moerl, M., Lorber, B., Sauter, C.

Description: Crystal structure of the CCA-adding enzyme of a psychrophilic organism in complex with CTP
[[Category: Unreleased Structures]]
[[Category: Bluhm, A]]
[[Category: Moerl, M]]
[[Category: Lorber, B]]
[[Category: Hennig, O]]
[[Category: Rollet, K]]
[[Category: Sauter, C]]
[[Category: Betat, H]]
[[Category: De Wijn, R]]