6rgw - Revision history

OCA at 12:20, 24 January 2024

OCA — Wed, 24 Jan 2024 12:20:13 GMT

←Older revision		Revision as of 12:20, 24 January 2024
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	==Photorhabdus asymbiotica lectin PHL in complex with O-methylated PGL-1-derived disaccharide==		==Photorhabdus asymbiotica lectin PHL in complex with O-methylated PGL-1-derived disaccharide==
-	<StructureSection load='6rgw' size='340' side='right'caption='[[6rgw]]' scene=''>	+	<StructureSection load='6rgw' size='340' side='right'caption='[[6rgw]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RGW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RGW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6rgw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Photorhabdus_asymbiotica Photorhabdus asymbiotica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RGW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RGW FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rgw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rgw OCA], [https://pdbe.org/6rgw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rgw RCSB], [https://www.ebi.ac.uk/pdbsum/6rgw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rgw ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.75Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7CV:6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose'>7CV</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K3Q:3,6-O-dimethyl-D-glucose'>K3Q</scene>, <scene name='pdbligand=K42:4-(2-azanylethoxy)phenol'>K42</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rgw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rgw OCA], [https://pdbe.org/6rgw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rgw RCSB], [https://www.ebi.ac.uk/pdbsum/6rgw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rgw ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/C7BLE4_PHOAA C7BLE4_PHOAA]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	O-methylation is an unusual sugar modification with a function that is not fully understood. Given its occurrence and recognition by lectins involved in the immune response, methylated sugars were proposed to represent a conserved pathogen-associated molecular pattern. We describe the interaction of O-methylated saccharides with two beta-propeller lectins, the newly described PLL2 from the entomopathogenic bacterium Photorhabdus laumondii, and its homologue PHL from the related human pathogen Photorhabdus asymbiotica. The crystal structures of PLL2 and PHL revealed up to 10 out of 14 potential binding sites per protein subunit to be occupied with O-methylated structures. The avidity effect strengthens the interaction by 4 orders of magnitude. PLL2 and PHL also interfere with the early immune response by modulating the production of reactive oxygen species and phenoloxidase activity. Since bacteria from Photorhabdus spp. have a complex life cycle involving pathogenicity towards different hosts, the involvement of PLL2 and PHL might contribute to the pathogen overcoming insect and human immune system defenses in the early stages of infection.
		+
		+	Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.,Fujdiarova E, Houser J, Dobes P, Paulikova G, Kondakov N, Kononov L, Hyrsl P, Wimmerova M FEBS J. 2020 Jun 19. doi: 10.1111/febs.15457. PMID:32559333<ref>PMID:32559333</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6rgw" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Photorhabdus asymbiotica]]
	[[Category: Fujdiarova E]]		[[Category: Fujdiarova E]]
	[[Category: Houser J]]		[[Category: Houser J]]
	[[Category: Jancarikova G]]		[[Category: Jancarikova G]]
	[[Category: Wimmerova M]]		[[Category: Wimmerova M]]

OCA at 08:55, 18 February 2021

OCA — Thu, 18 Feb 2021 08:55:28 GMT

←Older revision		Revision as of 08:55, 18 February 2021
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 6rgw is ON HOLD~~	+	==Photorhabdus asymbiotica lectin PHL in complex with O-methylated PGL-1-derived disaccharide==
-		+	<StructureSection load='6rgw' size='340' side='right'caption='[[6rgw]]' scene=''>
-	~~Authors: Houser, J., Fujdiarova, E., Jancarikova, G., Wimmerova, M.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RGW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RGW FirstGlance]. <br>
-	~~Description:~~ Photorhabdus asymbiotica lectin PHL in complex with O-methylated PGL-1-derived disaccharide	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rgw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rgw OCA], [https://pdbe.org/6rgw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rgw RCSB], [https://www.ebi.ac.uk/pdbsum/6rgw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rgw ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</table>
-	[[~~Category~~: ~~Wimmerova~~, M]]	+	__TOC__
-	[[Category: ~~Jancarikova, G~~]]	+	</StructureSection>
-	[[Category: Houser, J]]	+	[[Category: Large Structures]]
-	[[Category: ~~Fujdiarova, E~~]]	+	[[Category: Fujdiarova E]]
		+	[[Category: Houser J]]
		+	[[Category: Jancarikova G]]
		+	[[Category: Wimmerova M]]

OCA: Protected "6rgw" [edit=sysop:move=sysop]

OCA — Wed, 24 Apr 2019 05:18:55 GMT

Protected "6rgw" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:18, 24 April 2019

OCA: New page: '''Unreleased structure''' The entry 6rgw is ON HOLD Authors: Houser, J., Fujdiarova, E., Jancarikova, G., Wimmerova, M. Description: Photorhabdus asymbiotica lectin PHL in complex wit...

OCA — Wed, 24 Apr 2019 05:18:54 GMT

New page: '''Unreleased structure''' The entry 6rgw is ON HOLD Authors: Houser, J., Fujdiarova, E., Jancarikova, G., Wimmerova, M. Description: Photorhabdus asymbiotica lectin PHL in complex wit...

New page

'''Unreleased structure'''

The entry 6rgw is ON HOLD

Authors: Houser, J., Fujdiarova, E., Jancarikova, G., Wimmerova, M.

Description: Photorhabdus asymbiotica lectin PHL in complex with O-methylated PGL-1-derived disaccharide
[[Category: Unreleased Structures]]
[[Category: Wimmerova, M]]
[[Category: Jancarikova, G]]
[[Category: Houser, J]]
[[Category: Fujdiarova, E]]