6tvi - Revision history

OCA at 13:10, 24 January 2024

OCA — Wed, 24 Jan 2024 13:10:23 GMT

←Older revision		Revision as of 13:10, 24 January 2024
Line 3:		Line 3:
	<StructureSection load='6tvi' size='340' side='right'caption='[[6tvi]], [[Resolution\|resolution]] 1.00Å' scene=''>		<StructureSection load='6tvi' size='340' side='right'caption='[[6tvi]], [[Resolution\|resolution]] 1.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6tvi]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TVI OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6TVI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6tvi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TVI FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=DAN:2~~-~~DEOXY-2~~,~~3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1Å</td></tr>
-	<tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"><~~span class~~='~~plainlinks'>[http~~:~~//en.wikipedia.org/wiki/Exo~~-~~alpha~~-~~sialidase Exo~~-~~alpha~~-~~sialidase], with EC number [http://www.brenda~~-~~enzymes.info~~/~~php/result_flat.php4?ecno~~=~~3.2.1.18 3.2.1.18]~~ </~~span~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6tvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tvi OCA], [~~http~~://pdbe.org/6tvi PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6tvi RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6tvi PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6tvi ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tvi OCA], [https://pdbe.org/6tvi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tvi RCSB], [https://www.ebi.ac.uk/pdbsum/6tvi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tvi ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/NANH_SALTY NANH_SALTY]] Cleaves the terminal sialic acid (N-acetyl neuraminic acid) from carbohydrate chains in glycoproteins providing free sialic acid which can be used as carbon and energy sources. Sialidases have been suggested to be pathogenic factors in microbial infections.	+	[https://www.uniprot.org/uniprot/NANH_SALTY NANH_SALTY] Cleaves the terminal sialic acid (N-acetyl neuraminic acid) from carbohydrate chains in glycoproteins providing free sialic acid which can be used as carbon and energy sources. Sialidases have been suggested to be pathogenic factors in microbial infections.
		+
		+	==See Also==
		+	*[[Neuraminidase 3D structures\|Neuraminidase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Exo-alpha-sialidase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Garman~~, E F~~]]	+	[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
-	[[Category: Kuhn, P]]	+	[[Category: Garman EF]]
-	[[Category: Laver~~, W G~~]]	+	[[Category: Kuhn P]]
-	[[Category: Murray~~, J W~~]]	+	[[Category: Laver WG]]
-	[[Category: Salinger~~, M T~~]]	+	[[Category: Murray JW]]
-	[[Category: Vimr~~, E R]]~~	+	[[Category: Salinger MT]]
-	~~[[Category: Complex]]~~	+	[[Category: Vimr ER]]
-	~~[[Category: D100s mutant neuraminidase complexed with dana]]~~	+
-	~~[[Category: Dana]]~~	+
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Salmonella typhimurium enzyme]]~~	+
-	~~[[Category: Sialidase~~]]	+

OCA at 04:27, 13 February 2020

OCA — Thu, 13 Feb 2020 04:27:08 GMT

←Older revision		Revision as of 04:27, 13 February 2020
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6tvi ~~is ON HOLD~~	+	==Salmonella typhimurium mutant neuraminidase (D100S)+ DANA==
-		+	<StructureSection load='6tvi' size='340' side='right'caption='[[6tvi]], [[Resolution\|resolution]] 1.00Å' scene=''>
-	~~Authors~~: ~~Garman, E~~.F., ~~Salinger~~, M.T., ~~Murray~~, J.W., ~~Laver~~, W.G., ~~Kuhn, P~~., ~~Vimr, E~~.R.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6tvi]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TVI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6TVI FirstGlance]. <br>
-	~~Description~~: ~~Salmonella typhimurium mutant neuraminidase~~ (~~D100S~~)~~+ DANA~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Exo-alpha-sialidase Exo-alpha-sialidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.18 3.2.1.18] </span></td></tr>
-	[[Category: Garman, E.F]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6tvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tvi OCA], [http://pdbe.org/6tvi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tvi RCSB], [http://www.ebi.ac.uk/pdbsum/6tvi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tvi ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NANH_SALTY NANH_SALTY]] Cleaves the terminal sialic acid (N-acetyl neuraminic acid) from carbohydrate chains in glycoproteins providing free sialic acid which can be used as carbon and energy sources. Sialidases have been suggested to be pathogenic factors in microbial infections.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Exo-alpha-sialidase]]
		+	[[Category: Large Structures]]
		+	[[Category: Garman, E F]]
	[[Category: Kuhn, P]]		[[Category: Kuhn, P]]
-	[[Category: Laver, W.G]]	+	[[Category: Laver, W G]]
-	[[Category: Salinger, M.T]]	+	[[Category: Murray, J W]]
-	[[Category: Vimr, E.R]]	+	[[Category: Salinger, M T]]
-	[[Category: ~~Murray, J.W~~]]	+	[[Category: Vimr, E R]]
		+	[[Category: Complex]]
		+	[[Category: D100s mutant neuraminidase complexed with dana]]
		+	[[Category: Dana]]
		+	[[Category: Hydrolase]]
		+	[[Category: Salmonella typhimurium enzyme]]
		+	[[Category: Sialidase]]

OCA: Protected "6tvi" [edit=sysop:move=sysop]

OCA — Wed, 22 Jan 2020 13:58:35 GMT

Protected "6tvi" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:58, 22 January 2020

OCA: New page: '''Unreleased structure''' The entry 6tvi is ON HOLD Authors: Garman, E.F., Salinger, M.T., Murray, J.W., Laver, W.G., Kuhn, P., Vimr, E.R. Description: Salmonella typhimurium mutant n...

OCA — Wed, 22 Jan 2020 13:58:34 GMT

New page: '''Unreleased structure''' The entry 6tvi is ON HOLD Authors: Garman, E.F., Salinger, M.T., Murray, J.W., Laver, W.G., Kuhn, P., Vimr, E.R. Description: Salmonella typhimurium mutant n...

New page

'''Unreleased structure'''

The entry 6tvi is ON HOLD

Authors: Garman, E.F., Salinger, M.T., Murray, J.W., Laver, W.G., Kuhn, P., Vimr, E.R.

Description: Salmonella typhimurium mutant neuraminidase (D100S)+ DANA
[[Category: Unreleased Structures]]
[[Category: Garman, E.F]]
[[Category: Kuhn, P]]
[[Category: Laver, W.G]]
[[Category: Salinger, M.T]]
[[Category: Vimr, E.R]]
[[Category: Murray, J.W]]