6v59 - Revision history

OCA at 08:03, 11 October 2023

OCA — Wed, 11 Oct 2023 08:03:57 GMT

←Older revision		Revision as of 08:03, 11 October 2023
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	<StructureSection load='6v59' size='340' side='right'caption='[[6v59]], [[Resolution\|resolution]] 1.59Å' scene=''>		<StructureSection load='6v59' size='340' side='right'caption='[[6v59]], [[Resolution\|resolution]] 1.59Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6v59]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Burta Burta~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V59 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6V59 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6v59]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_thailandensis_E264 Burkholderia thailandensis E264]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V59 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6V59 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.593Å</td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BTH_II1092 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=271848 BURTA])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6v59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v59 OCA], [~~http~~://pdbe.org/6v59 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6v59 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6v59 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6v59 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6v59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v59 OCA], [https://pdbe.org/6v59 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6v59 RCSB], [https://www.ebi.ac.uk/pdbsum/6v59 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6v59 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q2T6B0_BURTA Q2T6B0_BURTA]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Burta~~]]	+	[[Category: Burkholderia thailandensis E264]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Cohen~~, S E~~]]	+	[[Category: Cohen SE]]
-	[[Category: Drennan~~, C L]]~~	+	[[Category: Drennan CL]]
-	~~[[Category: Btha]]~~	+
-	~~[[Category: Diheme]]~~	+
-	~~[[Category: Heme]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Peroxidase~~]]	+

OCA at 11:36, 29 July 2020

OCA — Wed, 29 Jul 2020 11:36:38 GMT

←Older revision		Revision as of 11:36, 29 July 2020
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	==Crystal structure of the diheme peroxidase BthA Y463M variant from Burkholderia thailandensis E264==		==Crystal structure of the diheme peroxidase BthA Y463M variant from Burkholderia thailandensis E264==
-	<StructureSection load='6v59' size='340' side='right'caption='[[6v59]]' scene=''>	+	<StructureSection load='6v59' size='340' side='right'caption='[[6v59]], [[Resolution\|resolution]] 1.59Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V59 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V59 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6v59]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burta Burta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V59 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V59 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v59 OCA], [http://pdbe.org/6v59 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v59 RCSB], [http://www.ebi.ac.uk/pdbsum/6v59 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v59 ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BTH_II1092 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=271848 BURTA])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v59 OCA], [http://pdbe.org/6v59 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v59 RCSB], [http://www.ebi.ac.uk/pdbsum/6v59 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v59 ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	BthA is a diheme enzyme that is a member of the bacterial cytochrome c peroxidase superfamily, capable of generating a highly unusual Fe(IV)Fe(IV) horizontal lineO oxidation state, known to be responsible for long-range oxidative chemistry in the enzyme MauG. Here, we show that installing a canonical Met ligand in lieu of the Tyr found at the heme of MauG associated with electron transfer, results in a construct that yields an unusually stable Fe(IV) horizontal lineO porphyrin at the peroxidatic heme. This state is spontaneously formed at ambient conditions using either molecular O2 or H2O2. The resulting data illustrate how a ferryl iron, with unforeseen stability, may be achieved in biology.
		+
		+	A Stable Ferryl Porphyrin at the Active Site of Y463M BthA.,Rizzolo K, Weitz AC, Cohen SE, Drennan CL, Hendrich MP, Elliott SJ J Am Chem Soc. 2020 Jul 1. doi: 10.1021/jacs.0c04023. PMID:32564595<ref>PMID:32564595</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6v59" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Cytochrome c peroxidase 3D structures\|Cytochrome c peroxidase 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Burta]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Cohen SE]]	+	[[Category: Cohen, S E]]
-	[[Category: Drennan CL]]	+	[[Category: Drennan, C L]]
		+	[[Category: Btha]]
		+	[[Category: Diheme]]
		+	[[Category: Heme]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Peroxidase]]

OCA at 14:07, 8 July 2020

OCA — Wed, 08 Jul 2020 14:07:12 GMT

←Older revision		Revision as of 14:07, 8 July 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 6v59 ~~is ON HOLD until Paper Publication~~	+	==Crystal structure of the diheme peroxidase BthA Y463M variant from Burkholderia thailandensis E264==
-		+	<StructureSection load='6v59' size='340' side='right'caption='[[6v59]]' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V59 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V59 FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v59 OCA], [http://pdbe.org/6v59 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v59 RCSB], [http://www.ebi.ac.uk/pdbsum/6v59 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v59 ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Cohen SE]]
		+	[[Category: Drennan CL]]

OCA: Protected "6v59" [edit=sysop:move=sysop]

OCA — Wed, 11 Dec 2019 13:45:50 GMT

Protected "6v59" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:45, 11 December 2019

OCA: New page: '''Unreleased structure''' The entry 6v59 is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

OCA — Wed, 11 Dec 2019 13:45:49 GMT

New page: '''Unreleased structure''' The entry 6v59 is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6v59 is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]