6ylo - Revision history

OCA at 13:29, 24 January 2024

OCA — Wed, 24 Jan 2024 13:29:58 GMT

←Older revision		Revision as of 13:29, 24 January 2024
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	==mTurquoise2 - Directionality of Optical Properties of Fluorescent Proteins==		==mTurquoise2 - Directionality of Optical Properties of Fluorescent Proteins==
-	<StructureSection load='6ylo' size='340' side='right'caption='[[6ylo]]' scene=''>	+	<StructureSection load='6ylo' size='340' side='right'caption='[[6ylo]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YLO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6YLO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6ylo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YLO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YLO FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6ylo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ylo OCA], [~~http~~://pdbe.org/6ylo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6ylo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6ylo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6ylo ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SWG:2-[(4Z)-2-[(1R)-1-AMINO-2-HYDROXY-ETHYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-IMIDAZOL-1-YL]ETHANOIC+ACID'>SWG</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ylo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ylo OCA], [https://pdbe.org/6ylo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ylo RCSB], [https://www.ebi.ac.uk/pdbsum/6ylo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ylo ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Fluorescent molecules are like antennas: The rate at which they absorb light depends on their orientation with respect to the incoming light wave, and the apparent intensity of their emission depends on their orientation with respect to the observer. However, the directions along which the most important fluorescent molecules in biology, fluorescent proteins (FPs), absorb and emit light are generally not known. Our optical and X-ray investigations of FP crystals have now allowed us to determine the molecular orientations of the excitation and emission transition dipole moments in the FPs mTurquoise2, eGFP, and mCherry, and the photoconvertible FP mEos4b. Our results will allow using FP directionality in studies of molecular and biological processes, but also in development of novel bioengineering and bioelectronics applications.
		+
		+	Directionality of light absorption and emission in representative fluorescent proteins.,Myskova J, Rybakova O, Brynda J, Khoroshyy P, Bondar A, Lazar J Proc Natl Acad Sci U S A. 2020 Dec 3. pii: 2017379117. doi:, 10.1073/pnas.2017379117. PMID:33273123<ref>PMID:33273123</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6ylo" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Synthetic construct]]
	[[Category: Brynda J]]		[[Category: Brynda J]]
	[[Category: Lazar J]]		[[Category: Lazar J]]
	[[Category: Myskova J]]		[[Category: Myskova J]]
	[[Category: Rybakova O]]		[[Category: Rybakova O]]

OCA at 12:33, 16 December 2020

OCA — Wed, 16 Dec 2020 12:33:14 GMT

←Older revision		Revision as of 12:33, 16 December 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 6ylo is ~~ON HOLD until sometime in~~ the ~~future~~	+	==mTurquoise2 - Directionality of Optical Properties of Fluorescent Proteins==
-		+	<StructureSection load='6ylo' size='340' side='right'caption='[[6ylo]]' scene=''>
-	~~Authors~~: ~~Myskova~~, J., ~~Rybakova~~, O., ~~Brynda, J~~., ~~Lazar, J~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YLO OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6YLO FirstGlance]. <br>
-	~~Description: mTurquoise2 -Directionality of Optical Properties of Fluorescent Proteins~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ylo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ylo OCA], [http://pdbe.org/6ylo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ylo RCSB], [http://www.ebi.ac.uk/pdbsum/6ylo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ylo ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
-	[[Category: ~~Myskova,~~ J]]	+	__TOC__
-	[[Category: Lazar, J]]	+	</StructureSection>
-	[[Category: ~~Brynda,~~ J]]	+	[[Category: Large Structures]]
-	[[Category: Rybakova, O]]	+	[[Category: Brynda J]]
		+	[[Category: Lazar J]]
		+	[[Category: Myskova J]]
		+	[[Category: Rybakova O]]

OCA: Protected "6ylo" [edit=sysop:move=sysop]

OCA — Wed, 15 Apr 2020 05:36:04 GMT

Protected "6ylo" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:36, 15 April 2020

OCA: New page: '''Unreleased structure''' The entry 6ylo is ON HOLD until sometime in the future Authors: Myskova, J., Rybakova, O., Brynda, J., Lazar, J. Description: mTurquoise2 -Directionality of ...

OCA — Wed, 15 Apr 2020 05:36:01 GMT

New page: '''Unreleased structure''' The entry 6ylo is ON HOLD until sometime in the future Authors: Myskova, J., Rybakova, O., Brynda, J., Lazar, J. Description: mTurquoise2 -Directionality of ...

New page

'''Unreleased structure'''

The entry 6ylo is ON HOLD until sometime in the future

Authors: Myskova, J., Rybakova, O., Brynda, J., Lazar, J.

Description: mTurquoise2 -Directionality of Optical Properties of Fluorescent Proteins
[[Category: Unreleased Structures]]
[[Category: Myskova, J]]
[[Category: Lazar, J]]
[[Category: Brynda, J]]
[[Category: Rybakova, O]]