7aw8 - Revision history

OCA at 12:17, 1 February 2024

OCA — Thu, 01 Feb 2024 12:17:23 GMT

←Older revision		Revision as of 12:17, 1 February 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[7aw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodamnia_argentea Rhodamnia argentea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AW8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[7aw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodamnia_argentea Rhodamnia argentea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AW8 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7aw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7aw8 OCA], [https://pdbe.org/7aw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7aw8 RCSB], [https://www.ebi.ac.uk/pdbsum/7aw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7aw8 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7aw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7aw8 OCA], [https://pdbe.org/7aw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7aw8 RCSB], [https://www.ebi.ac.uk/pdbsum/7aw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7aw8 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 10:05, 21 December 2022

OCA — Wed, 21 Dec 2022 10:05:55 GMT

←Older revision		Revision as of 10:05, 21 December 2022
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	</div>		</div>
	<div class="pdbe-citations 7aw8" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 7aw8" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Actinin 3D structures\|Actinin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Rhodamnia argentea]]		[[Category: Rhodamnia argentea]]
-	[[Category: Backman, L]]	+	[[Category: Backman L]]
-	[[Category: Persson, K]]	+	[[Category: Persson K]]
-	~~[[Category: Actin binding]]~~	+
-	~~[[Category: Alpha actinin]]~~	+
-	~~[[Category: Cell cycle~~]]	+

OCA at 08:59, 29 September 2021

OCA — Wed, 29 Sep 2021 08:59:19 GMT

←Older revision		Revision as of 08:59, 29 September 2021
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	==Alpha-actinin in Rhodamnia argentea==		==Alpha-actinin in Rhodamnia argentea==
-	<StructureSection load='7aw8' size='340' side='right'caption='[[7aw8]]' scene=''>	+	<StructureSection load='7aw8' size='340' side='right'caption='[[7aw8]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AW8 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7aw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodamnia_argentea Rhodamnia argentea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AW8 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7aw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7aw8 OCA], [https://pdbe.org/7aw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7aw8 RCSB], [https://www.ebi.ac.uk/pdbsum/7aw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7aw8 ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7aw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7aw8 OCA], [https://pdbe.org/7aw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7aw8 RCSB], [https://www.ebi.ac.uk/pdbsum/7aw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7aw8 ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The Australian tree malletwood (Rhodamnia argentea) is unique. The genome of malletwood is the only known plant genome that contains a gene coding for an alpha-actinin-like protein. Several organisms predating the animal-plant bifurcation express an alpha-actinin or alpha-actinin-like protein. Therefore, it appears that plants in general, but not malletwood, have lost the alpha-actinin or alpha-actinin-like gene during evolution. In order to characterize its structure and function, we synthesized the gene and expressed the recombinant R. argentea protein. The results clearly show that this protein has all properties of genuine alpha-actinin. The N-terminal actin-binding domain (ABD), with two calponin homology motifs, is very similar to the ABD of any alpha-actinin. The C-terminal calmodulin-like domain, as well as the intervening rod domain, are also similar to the corresponding regions in other alpha-actinins. The R. argentea alpha-actinin-like protein dimerises in solution and thereby can cross-link actin filaments. Based on these results, we believe the R. argentea protein represents a genuine alpha-actinin, making R. argentea unique in the plant world.
		+
		+	Structural and functional characterization of a plant alpha-actinin.,Persson K, Backman L FEBS Open Bio. 2021 Jun 10. doi: 10.1002/2211-5463.13222. PMID:34110107<ref>PMID:34110107</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7aw8" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Backman L]]	+	[[Category: Rhodamnia argentea]]
-	[[Category: Persson K]]	+	[[Category: Backman, L]]
		+	[[Category: Persson, K]]
		+	[[Category: Actin binding]]
		+	[[Category: Alpha actinin]]
		+	[[Category: Cell cycle]]

OCA at 06:05, 11 August 2021

OCA — Wed, 11 Aug 2021 06:05:30 GMT

←Older revision		Revision as of 06:05, 11 August 2021
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-	'''Unreleased structure'''

-	~~The entry~~ 7aw8 ~~is ON HOLD~~	+	==Alpha-actinin in Rhodamnia argentea==
-		+	<StructureSection load='7aw8' size='340' side='right'caption='[[7aw8]]' scene=''>
-	~~Authors~~: ~~Persson~~, K., ~~Backman~~, L.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AW8 FirstGlance]. <br>
-	~~Description~~: ~~Alpha~~-~~actinin in Rhodamnia argentea~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7aw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7aw8 OCA], [https://pdbe.org/7aw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7aw8 RCSB], [https://www.ebi.ac.uk/pdbsum/7aw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7aw8 ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
-	[[Category: Backman, L]]	+	__TOC__
-	[[Category: Persson, K]]	+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Backman L]]
		+	[[Category: Persson K]]

OCA at 05:30, 2 December 2020

OCA — Wed, 02 Dec 2020 05:30:58 GMT

←Older revision		Revision as of 05:30, 2 December 2020
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7aw8 is ON HOLD ~~until sometime in the future~~	+	The entry 7aw8 is ON HOLD

	Authors: Persson, K., Backman, L.		Authors: Persson, K., Backman, L.
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	Description: Alpha-actinin in Rhodamnia argentea		Description: Alpha-actinin in Rhodamnia argentea
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Persson, K]]
	[[Category: Backman, L]]		[[Category: Backman, L]]
		+	[[Category: Persson, K]]

OCA: Protected "7aw8" [edit=sysop:move=sysop]

OCA — Wed, 18 Nov 2020 07:53:00 GMT

Protected "7aw8" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:53, 18 November 2020

OCA: New page: '''Unreleased structure''' The entry 7aw8 is ON HOLD until sometime in the future Authors: Persson, K., Backman, L. Description: Alpha-actinin in Rhodamnia argentea [[Category: Unrelea...

OCA — Wed, 18 Nov 2020 07:52:59 GMT

New page: '''Unreleased structure''' The entry 7aw8 is ON HOLD until sometime in the future Authors: Persson, K., Backman, L. Description: Alpha-actinin in Rhodamnia argentea [[Category: Unrelea...

New page

'''Unreleased structure'''

The entry 7aw8 is ON HOLD until sometime in the future

Authors: Persson, K., Backman, L.

Description: Alpha-actinin in Rhodamnia argentea
[[Category: Unreleased Structures]]
[[Category: Persson, K]]
[[Category: Backman, L]]