7dpk - Revision history

OCA at 16:37, 29 November 2023

OCA — Wed, 29 Nov 2023 16:37:35 GMT

←Older revision		Revision as of 16:37, 29 November 2023
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	==The structure of the exchange reaction of the Arabidopsis thaliana guanosine deaminase in complex with 7-deazaguaosine by guanosine==		==The structure of the exchange reaction of the Arabidopsis thaliana guanosine deaminase in complex with 7-deazaguaosine by guanosine==
-	<StructureSection load='7dpk' size='340' side='right'caption='[[7dpk]]' scene=''>	+	<StructureSection load='7dpk' size='340' side='right'caption='[[7dpk]], [[Resolution\|resolution]] 2.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DPK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7dpk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DPK FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dpk OCA], [https://pdbe.org/7dpk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dpk RCSB], [https://www.ebi.ac.uk/pdbsum/7dpk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dpk ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.15Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4UO:2,3-DIHYDROXANTHOSINE'>4UO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dpk OCA], [https://pdbe.org/7dpk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dpk RCSB], [https://www.ebi.ac.uk/pdbsum/7dpk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dpk ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/GSDA_ARATH GSDA_ARATH] Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.<ref>PMID:24130159</ref>
		+
		+	==See Also==
		+	*[[Deaminase 3D structures\|Deaminase 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Arabidopsis thaliana]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Jia Q]]		[[Category: Jia Q]]
	[[Category: Xie W]]		[[Category: Xie W]]
	[[Category: Zeng H]]		[[Category: Zeng H]]

OCA at 06:58, 2 February 2022

OCA — Wed, 02 Feb 2022 06:58:09 GMT

←Older revision		Revision as of 06:58, 2 February 2022
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-	'''Unreleased structure'''

-	~~The entry 7dpk is ON HOLD until Jan 27 2023~~	+	==The structure of the exchange reaction of the Arabidopsis thaliana guanosine deaminase in complex with 7-deazaguaosine by guanosine==
-		+	<StructureSection load='7dpk' size='340' side='right'caption='[[7dpk]]' scene=''>
-	~~Authors: Xie, W., Jia, Q., Zeng, H.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DPK FirstGlance]. <br>
-	~~Description:~~ The structure of the exchange reaction of the Arabidopsis thaliana guanosine deaminase in complex with 7-deazaguaosine by guanosine	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dpk OCA], [https://pdbe.org/7dpk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dpk RCSB], [https://www.ebi.ac.uk/pdbsum/7dpk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dpk ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</table>
-	[[~~Category~~: ~~Xie~~, W]]	+	__TOC__
-	[[Category: ~~Zeng, H~~]]	+	</StructureSection>
-	[[Category: Jia, Q]]	+	[[Category: Large Structures]]
		+	[[Category: Jia Q]]
		+	[[Category: Xie W]]
		+	[[Category: Zeng H]]

OCA at 11:55, 17 November 2021

OCA — Wed, 17 Nov 2021 11:55:50 GMT

←Older revision		Revision as of 11:55, 17 November 2021
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7dpk is ON HOLD until ~~Dec 19 2022~~	+	The entry 7dpk is ON HOLD until Jan 27 2023

	Authors: Xie, W., Jia, Q., Zeng, H.		Authors: Xie, W., Jia, Q., Zeng, H.
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	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
	[[Category: Xie, W]]		[[Category: Xie, W]]
-	[[Category: Jia, Q]]
	[[Category: Zeng, H]]		[[Category: Zeng, H]]
		+	[[Category: Jia, Q]]

OCA: Protected "7dpk" [edit=sysop:move=sysop]

OCA — Wed, 30 Dec 2020 05:22:20 GMT

Protected "7dpk" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:22, 30 December 2020

OCA: New page: '''Unreleased structure''' The entry 7dpk is ON HOLD until Dec 19 2022 Authors: Xie, W., Jia, Q., Zeng, H. Description: The structure of the exchange reaction of the Arabidopsis thalia...

OCA — Wed, 30 Dec 2020 05:22:19 GMT

New page: '''Unreleased structure''' The entry 7dpk is ON HOLD until Dec 19 2022 Authors: Xie, W., Jia, Q., Zeng, H. Description: The structure of the exchange reaction of the Arabidopsis thalia...

New page

'''Unreleased structure'''

The entry 7dpk is ON HOLD until Dec 19 2022

Authors: Xie, W., Jia, Q., Zeng, H.

Description: The structure of the exchange reaction of the Arabidopsis thaliana guanosine deaminase in complex with 7-deazaguaosine by guanosine
[[Category: Unreleased Structures]]
[[Category: Xie, W]]
[[Category: Jia, Q]]
[[Category: Zeng, H]]