7dv3 - Revision history

OCA at 16:39, 29 November 2023

OCA — Wed, 29 Nov 2023 16:39:59 GMT

←Older revision		Revision as of 16:39, 29 November 2023
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	<StructureSection load='7dv3' size='340' side='right'caption='[[7dv3]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='7dv3' size='340' side='right'caption='[[7dv3]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[7dv3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DV3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7dv3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DV3 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.6Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dv3 OCA], [https://pdbe.org/7dv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dv3 RCSB], [https://www.ebi.ac.uk/pdbsum/7dv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dv3 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dv3 OCA], [https://pdbe.org/7dv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dv3 RCSB], [https://www.ebi.ac.uk/pdbsum/7dv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dv3 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q981B3_SACS2 Q981B3_SACS2]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Hsiao, C D~~]]	+	[[Category: Saccharolobus solfataricus P2]]
-	[[Category: ~~Lin, M G~~]]	+	[[Category: Hsiao CD]]
-	[[Category: ~~Sun, Y J~~]]	+	[[Category: Lin MG]]
-	[[Category: ~~Wu, C T~~]]	+	[[Category: Sun YJ]]
-	[[Category: ~~Yen, C Y~~]]	+	[[Category: Wu CT]]
-	[[Category: ~~Dna binding protein]]~~	+	[[Category: Yen CY]]
-	~~[[Category: Partition protein~~]]	+

OCA at 10:52, 16 February 2022

OCA — Wed, 16 Feb 2022 10:52:02 GMT

←Older revision		Revision as of 10:52, 16 February 2022
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	==Structure of Sulfolobus solfataricus SegA-AMPPNP protein==		==Structure of Sulfolobus solfataricus SegA-AMPPNP protein==
-	<StructureSection load='7dv3' size='340' side='right'caption='[[7dv3]]' scene=''>	+	<StructureSection load='7dv3' size='340' side='right'caption='[[7dv3]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DV3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7dv3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DV3 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dv3 OCA], [https://pdbe.org/7dv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dv3 RCSB], [https://www.ebi.ac.uk/pdbsum/7dv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dv3 ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dv3 OCA], [https://pdbe.org/7dv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dv3 RCSB], [https://www.ebi.ac.uk/pdbsum/7dv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dv3 ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Genome segregation is a vital process in all organisms. Chromosome partitioning remains obscure in Archaea, the third domain of life. Here, we investigated the SegAB system from Sulfolobus solfataricus. SegA is a ParA Walker-type ATPase and SegB is a site-specific DNA-binding protein. We determined the structures of both proteins and those of SegA-DNA and SegB-DNA complexes. The SegA structure revealed an atypical, novel non-sandwich dimer that binds DNA either in the presence or in the absence of ATP. The SegB structure disclosed a ribbon-helix-helix motif through which the protein binds DNA site specifically. The association of multiple interacting SegB dimers with the DNA results in a higher order chromatin-like structure. The unstructured SegB N-terminus plays an essential catalytic role in stimulating SegA ATPase activity and an architectural regulatory role in segrosome (SegA-SegB-DNA) formation. Electron microscopy results also provide a compact ring-like segrosome structure related to chromosome organization. These findings contribute a novel mechanistic perspective on archaeal chromosome segregation.
		+
		+	Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly.,Yen CY, Lin MG, Chen BW, Ng IW, Read N, Kabli AF, Wu CT, Shen YY, Chen CH, Barilla D, Sun YJ, Hsiao CD Nucleic Acids Res. 2021 Dec 16;49(22):13150-13164. doi: 10.1093/nar/gkab1155. PMID:34850144<ref>PMID:34850144</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7dv3" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Hsiao CD]]	+	[[Category: Hsiao, C D]]
-	[[Category: Lin MG]]	+	[[Category: Lin, M G]]
-	[[Category: Sun YJ]]	+	[[Category: Sun, Y J]]
-	[[Category: Wu CT]]	+	[[Category: Wu, C T]]
-	[[Category: Yen CY]]	+	[[Category: Yen, C Y]]
		+	[[Category: Dna binding protein]]
		+	[[Category: Partition protein]]

OCA at 15:24, 22 December 2021

OCA — Wed, 22 Dec 2021 15:24:51 GMT

←Older revision		Revision as of 15:24, 22 December 2021
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-	'''Unreleased structure'''

-	~~The entry~~ 7dv3 is ~~ON HOLD until Paper Publication~~	+	==Structure of Sulfolobus solfataricus SegA-AMPPNP protein==
-		+	<StructureSection load='7dv3' size='340' side='right'caption='[[7dv3]]' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DV3 FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dv3 OCA], [https://pdbe.org/7dv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dv3 RCSB], [https://www.ebi.ac.uk/pdbsum/7dv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dv3 ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Hsiao CD]]
		+	[[Category: Lin MG]]
		+	[[Category: Sun YJ]]
		+	[[Category: Wu CT]]
		+	[[Category: Yen CY]]

OCA at 09:18, 3 February 2021

OCA — Wed, 03 Feb 2021 09:18:04 GMT

←Older revision		Revision as of 09:18, 3 February 2021
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7dv3 is ON HOLD	+	The entry 7dv3 is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "7dv3" [edit=sysop:move=sysop]

OCA — Wed, 20 Jan 2021 06:48:50 GMT

Protected "7dv3" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:48, 20 January 2021

OCA: New page: '''Unreleased structure''' The entry 7dv3 is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 20 Jan 2021 06:48:49 GMT

New page: '''Unreleased structure''' The entry 7dv3 is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7dv3 is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]