7dvb - Revision history

OCA at 16:40, 29 November 2023

OCA — Wed, 29 Nov 2023 16:40:10 GMT

←Older revision		Revision as of 16:40, 29 November 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[7dvb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DVB FirstGlance]. <br>		<table><tr><td colspan='2'>[[7dvb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DVB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NGS:2-(ACETYLAMINO)-2-DEOXY-6-O-SULFO-BETA-D-GLUCOPYRANOSE'>NGS</scene>, <scene name='pdbligand=Q4Z:[(3~{a}~{R},5~{R},6~{S},7~{R},7~{a}~{R})-2-methyl-6,7-bis(oxidanyl)-5,6,7,7~{a}-tetrahydro-3~{a}~{H}-pyrano[3,2-d][1,3]oxazol-1-ium-5-yl]methyl+sulfate'>Q4Z</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.05Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NGS:2-(ACETYLAMINO)-2-DEOXY-6-O-SULFO-BETA-D-GLUCOPYRANOSE'>NGS</scene>, <scene name='pdbligand=Q4Z:[(3~{a}~{R},5~{R},6~{S},7~{R},7~{a}~{R})-2-methyl-6,7-bis(oxidanyl)-5,6,7,7~{a}-tetrahydro-3~{a}~{H}-pyrano[3,2-d][1,3]oxazol-1-ium-5-yl]methyl+sulfate'>Q4Z</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dvb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dvb OCA], [https://pdbe.org/7dvb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dvb RCSB], [https://www.ebi.ac.uk/pdbsum/7dvb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dvb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dvb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dvb OCA], [https://pdbe.org/7dvb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dvb RCSB], [https://www.ebi.ac.uk/pdbsum/7dvb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dvb ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:40, 18 January 2023

OCA — Wed, 18 Jan 2023 07:40:13 GMT

←Older revision		Revision as of 07:40, 18 January 2023
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-	==~~A complex~~ of ~~a new GH20 enzyme from Bacteroides thetaiotaomicron~~==	+	==D335N variant of Bt4394 in complex with 6SO3-NAG-oxazoline intermediate==
-	<StructureSection load='7dvb' size='340' side='right'caption='[[7dvb]]' scene=''>	+	<StructureSection load='7dvb' size='340' side='right'caption='[[7dvb]], [[Resolution\|resolution]] 2.05Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DVB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7dvb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DVB FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dvb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dvb OCA], [https://pdbe.org/7dvb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dvb RCSB], [https://www.ebi.ac.uk/pdbsum/7dvb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dvb ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NGS:2-(ACETYLAMINO)-2-DEOXY-6-O-SULFO-BETA-D-GLUCOPYRANOSE'>NGS</scene>, <scene name='pdbligand=Q4Z:[(3~{a}~{R},5~{R},6~{S},7~{R},7~{a}~{R})-2-methyl-6,7-bis(oxidanyl)-5,6,7,7~{a}-tetrahydro-3~{a}~{H}-pyrano[3,2-d][1,3]oxazol-1-ium-5-yl]methyl+sulfate'>Q4Z</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dvb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dvb OCA], [https://pdbe.org/7dvb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dvb RCSB], [https://www.ebi.ac.uk/pdbsum/7dvb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dvb ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0P0FIE8_BACT4 A0A0P0FIE8_BACT4]
		+
		+	==See Also==
		+	*[[Beta-N-acetylhexosaminidase 3D structures\|Beta-N-acetylhexosaminidase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacteroides thetaiotaomicron]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: He Y]]		[[Category: He Y]]
	[[Category: Jin Y]]		[[Category: Jin Y]]
	[[Category: Zhang Z]]		[[Category: Zhang Z]]

OCA at 07:26, 19 January 2022

OCA — Wed, 19 Jan 2022 07:26:57 GMT

←Older revision		Revision as of 07:26, 19 January 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 7dvb ~~is ON HOLD until Paper Publication~~	+	==A complex of a new GH20 enzyme from Bacteroides thetaiotaomicron==
-		+	<StructureSection load='7dvb' size='340' side='right'caption='[[7dvb]]' scene=''>
-	~~Authors~~: ~~Zhang~~, Z., He, Y., ~~Jin~~, Y.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DVB FirstGlance]. <br>
-	~~Description: A complex of a new GH20 enzyme from Bacteroides thetaiotaomicron~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dvb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dvb OCA], [https://pdbe.org/7dvb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dvb RCSB], [https://www.ebi.ac.uk/pdbsum/7dvb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dvb ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
-	[[Category: ~~Zhang, Z~~]]	+	__TOC__
-	[[Category: ~~He,~~ Y]]	+	</StructureSection>
-	[[Category: ~~Jin, Y~~]]	+	[[Category: Large Structures]]
		+	[[Category: He Y]]
		+	[[Category: Jin Y]]
		+	[[Category: Zhang Z]]

OCA at 05:30, 24 February 2021

OCA — Wed, 24 Feb 2021 05:30:58 GMT

←Older revision		Revision as of 05:30, 24 February 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7dvb is ON HOLD	+	The entry 7dvb is ON HOLD until Paper Publication

	Authors: Zhang, Z., He, Y., Jin, Y.		Authors: Zhang, Z., He, Y., Jin, Y.

OCA: Protected "7dvb" [edit=sysop:move=sysop]

OCA — Wed, 20 Jan 2021 06:49:16 GMT

Protected "7dvb" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:49, 20 January 2021

OCA: New page: '''Unreleased structure''' The entry 7dvb is ON HOLD Authors: Zhang, Z., He, Y., Jin, Y. Description: A complex of a new GH20 enzyme from Bacteroides thetaiotaomicron [[Category: Unrel...

OCA — Wed, 20 Jan 2021 06:49:15 GMT

New page: '''Unreleased structure''' The entry 7dvb is ON HOLD Authors: Zhang, Z., He, Y., Jin, Y. Description: A complex of a new GH20 enzyme from Bacteroides thetaiotaomicron [[Category: Unrel...

New page

'''Unreleased structure'''

The entry 7dvb is ON HOLD

Authors: Zhang, Z., He, Y., Jin, Y.

Description: A complex of a new GH20 enzyme from Bacteroides thetaiotaomicron
[[Category: Unreleased Structures]]
[[Category: Zhang, Z]]
[[Category: He, Y]]
[[Category: Jin, Y]]