7emq - Revision history

OCA at 16:56, 29 November 2023

OCA — Wed, 29 Nov 2023 16:56:49 GMT

←Older revision		Revision as of 16:56, 29 November 2023
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	<StructureSection load='7emq' size='340' side='right'caption='[[7emq]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='7emq' size='340' side='right'caption='[[7emq]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[7emq]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EMQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7emq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EMQ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC+ACID'>CXS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=J7X:Mn-5,10,15,20-Tetraphenylporphyrin'>J7X</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC+ACID'>CXS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=J7X:Mn-5,10,15,20-Tetraphenylporphyrin'>J7X</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7emq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7emq OCA], [https://pdbe.org/7emq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7emq RCSB], [https://www.ebi.ac.uk/pdbsum/7emq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7emq ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7emq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7emq OCA], [https://pdbe.org/7emq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7emq RCSB], [https://www.ebi.ac.uk/pdbsum/7emq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7emq ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/G3XD33_PSEAE G3XD33_PSEAE]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Sakakibara, E]]	+	[[Category: Pseudomonas aeruginosa PAO1]]
-	[[Category: Shisaka, Y]]	+	[[Category: Sakakibara E]]
-	[[Category: Shoji, O]]	+	[[Category: Shisaka Y]]
-	[[Category: Sugimoto, H]]	+	[[Category: Shoji O]]
-	~~[[Category: Heme acquisition protein]]~~	+	[[Category: Sugimoto H]]
-	~~[[Category: Transport protein~~]]	+

OCA at 06:31, 18 August 2022

OCA — Thu, 18 Aug 2022 06:31:45 GMT

←Older revision		Revision as of 06:31, 18 August 2022
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	==Crystal Structure of HasAp Capturing Manganese Tetraphenylporphyrin==		==Crystal Structure of HasAp Capturing Manganese Tetraphenylporphyrin==
-	<StructureSection load='7emq' size='340' side='right'caption='[[7emq]]' scene=''>	+	<StructureSection load='7emq' size='340' side='right'caption='[[7emq]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EMQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7emq]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EMQ FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7emq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7emq OCA], [https://pdbe.org/7emq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7emq RCSB], [https://www.ebi.ac.uk/pdbsum/7emq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7emq ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC+ACID'>CXS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=J7X:Mn-5,10,15,20-Tetraphenylporphyrin'>J7X</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7emq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7emq OCA], [https://pdbe.org/7emq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7emq RCSB], [https://www.ebi.ac.uk/pdbsum/7emq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7emq ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Tetraphenylporphyrin (TPP) is a symmetrically substituted synthetic porphyrin whose properties can be readily modified, providing it with significant advantages over naturally occurring porphyrins. Herein, we report the first example of a stable complex between a native biomolecule, the haemoprotein HasA, and TPP as well as its derivatives. The X-ray crystal structures of nine different HasA-TPP complexes were solved at high resolutions. HasA capturing TPP derivatives was also demonstrated to inhibit growth of the opportunistic pathogen Pseudomonas aeruginosa. Mutant variants of HasA binding FeTPP were shown to possess a different mode of coordination, permitting the cyclopropanation of styrene.
		+
		+	Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.,Shisaka Y, Sakakibara E, Suzuki K, Stanfield JK, Onoda H, Ueda G, Hatano M, Sugimoto H, Shoji O Chembiochem. 2022 Jul 19;23(14):e202200095. doi: 10.1002/cbic.202200095. Epub, 2022 Apr 13. PMID:35352458<ref>PMID:35352458</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7emq" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Sakakibara E]]	+	[[Category: Sakakibara, E]]
-	[[Category: Shisaka Y]]	+	[[Category: Shisaka, Y]]
-	[[Category: Shoji O]]	+	[[Category: Shoji, O]]
-	[[Category: Sugimoto H]]	+	[[Category: Sugimoto, H]]
		+	[[Category: Heme acquisition protein]]
		+	[[Category: Transport protein]]

OCA at 02:49, 21 April 2022

OCA — Thu, 21 Apr 2022 02:49:32 GMT

←Older revision		Revision as of 02:49, 21 April 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 7emq is ~~ON HOLD until Paper Publication~~	+	==Crystal Structure of HasAp Capturing Manganese Tetraphenylporphyrin==
-		+	<StructureSection load='7emq' size='340' side='right'caption='[[7emq]]' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EMQ FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7emq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7emq OCA], [https://pdbe.org/7emq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7emq RCSB], [https://www.ebi.ac.uk/pdbsum/7emq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7emq ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Sakakibara E]]
		+	[[Category: Shisaka Y]]
		+	[[Category: Shoji O]]
		+	[[Category: Sugimoto H]]

OCA at 15:27, 15 December 2021

OCA — Wed, 15 Dec 2021 15:27:23 GMT

←Older revision		Revision as of 15:27, 15 December 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7emq is ON HOLD	+	The entry 7emq is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "7emq" [edit=sysop:move=sysop]

OCA — Wed, 21 Apr 2021 06:08:35 GMT

Protected "7emq" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:08, 21 April 2021

OCA: New page: '''Unreleased structure''' The entry 7emq is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 21 Apr 2021 06:08:33 GMT

New page: '''Unreleased structure''' The entry 7emq is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7emq is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]