7fer - Revision history

OCA at 05:22, 8 September 2022

OCA — Thu, 08 Sep 2022 05:22:39 GMT

←Older revision		Revision as of 05:22, 8 September 2022
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-	====	+	==Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2==
-	<StructureSection load='7fer' size='340' side='right'caption='[[7fer]]' scene=''>	+	<StructureSection load='7fer' size='340' side='right'caption='[[7fer]], [[Resolution\|resolution]] 3.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7fer]] is a 28 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7FER OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7FER FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7fer FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7fer OCA], [https://pdbe.org/7fer PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7fer RCSB], [https://www.ebi.ac.uk/pdbsum/7fer PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7fer ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAA:N-METHYL-L-ALANINE'>MAA</scene>, <scene name='pdbligand=MP8:(4R)-4-METHYL-L-PROLINE'>MP8</scene>, <scene name='pdbligand=OTT:(2E,4E,6E)-OCTA-2,4,6-TRIENOIC+ACID'>OTT</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7fer FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7fer OCA], [https://pdbe.org/7fer PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7fer RCSB], [https://www.ebi.ac.uk/pdbsum/7fer PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7fer ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/CLPP_BACSU CLPP_BACSU]] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). ClpXP is involved in the complete degradation of the Site-2 clipped anti-sigma-W factor RsiW. This results in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor.<ref>PMID:16899079</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacillus subtilis]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Z-~~disk~~]]	+	[[Category: Synthetic construct]]
		+	[[Category: Brotz-Oesterhelt H]]
		+	[[Category: Kim H]]
		+	[[Category: Kim L]]
		+	[[Category: Kim MK]]
		+	[[Category: Kwon DH]]
		+	[[Category: Lee B-G]]
		+	[[Category: Roh S-H]]
		+	[[Category: Song HK]]

OCA at 16:11, 6 July 2022

OCA — Wed, 06 Jul 2022 16:11:04 GMT

←Older revision		Revision as of 16:11, 6 July 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 7fer ~~is ON HOLD until Paper Publication~~	+	====
-		+	<StructureSection load='7fer' size='340' side='right'caption='[[7fer]]' scene=''>
-	~~Authors~~: ~~Kim, L~~.~~, Lee, B~~.-G.~~, Kim, M.K., Kwon, D.H., Kim, H., Brotz~~-~~Oesterhelt, H~~.~~, Roh, S~~.-H.~~, Song, H.K~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
-	~~Description~~: ~~Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7fer FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7fer OCA], [https://pdbe.org/7fer PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7fer RCSB], [https://www.ebi.ac.uk/pdbsum/7fer PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7fer ProSAT]</span></td></tr>
-	[~~[Category~~: ~~Unreleased Structures~~]]	+	</table>
-	[~~[Category~~: ~~Kim, M~~.K]]	+	__TOC__
-	[~~[Category~~: ~~Kim, H~~]]	+	</StructureSection>
-	~~[[Category: Brotz-Oesterhelt~~, ~~H]]~~	+	[[Category: Large Structures]]
-	[~~[Category~~: ~~Kwon, D~~.H]]	+	[[Category: Z-disk]]
-	[~~[Category~~: ~~Roh, S~~.-H]]	+
-	[~~[Category~~: ~~Lee, B~~.-G]]	+
-	[[Category: ~~Kim, L~~]]	+
-	[[Category: ~~Song, H.K~~]]	+

OCA at 11:42, 29 December 2021

OCA — Wed, 29 Dec 2021 11:42:36 GMT

←Older revision		Revision as of 11:42, 29 December 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7fer is ON HOLD	+	The entry 7fer is ON HOLD until Paper Publication

	Authors: Kim, L., Lee, B.-G., Kim, M.K., Kwon, D.H., Kim, H., Brotz-Oesterhelt, H., Roh, S.-H., Song, H.K.		Authors: Kim, L., Lee, B.-G., Kim, M.K., Kwon, D.H., Kim, H., Brotz-Oesterhelt, H., Roh, S.-H., Song, H.K.
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	Description: Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2		Description: Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Kwon, D.H]]
-	[[Category: Kim, L]]
	[[Category: Kim, M.K]]		[[Category: Kim, M.K]]
		+	[[Category: Kim, H]]
		+	[[Category: Brotz-Oesterhelt, H]]
		+	[[Category: Kwon, D.H]]
	[[Category: Roh, S.-H]]		[[Category: Roh, S.-H]]
	[[Category: Lee, B.-G]]		[[Category: Lee, B.-G]]
		+	[[Category: Kim, L]]
	[[Category: Song, H.K]]		[[Category: Song, H.K]]
-	[[Category: Kim, H]]
-	[[Category: Brotz-Oesterhelt, H]]

OCA: Protected "7fer" [edit=sysop:move=sysop]

OCA — Wed, 28 Jul 2021 09:21:43 GMT

Protected "7fer" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:21, 28 July 2021

OCA: New page: '''Unreleased structure''' The entry 7fer is ON HOLD Authors: Kim, L., Lee, B.-G., Kim, M.K., Kwon, D.H., Kim, H., Brotz-Oesterhelt, H., Roh, S.-H., Song, H.K. Description: Cryo-EM str...

OCA — Wed, 28 Jul 2021 09:21:42 GMT

New page: '''Unreleased structure''' The entry 7fer is ON HOLD Authors: Kim, L., Lee, B.-G., Kim, M.K., Kwon, D.H., Kim, H., Brotz-Oesterhelt, H., Roh, S.-H., Song, H.K. Description: Cryo-EM str...

New page

'''Unreleased structure'''

The entry 7fer is ON HOLD

Authors: Kim, L., Lee, B.-G., Kim, M.K., Kwon, D.H., Kim, H., Brotz-Oesterhelt, H., Roh, S.-H., Song, H.K.

Description: Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
[[Category: Unreleased Structures]]
[[Category: Kwon, D.H]]
[[Category: Kim, L]]
[[Category: Kim, M.K]]
[[Category: Roh, S.-H]]
[[Category: Lee, B.-G]]
[[Category: Song, H.K]]
[[Category: Kim, H]]
[[Category: Brotz-Oesterhelt, H]]