OCA at 15:30, 18 October 2023

OCA — Wed, 18 Oct 2023 15:30:13 GMT

←Older revision		Revision as of 15:30, 18 October 2023
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-	====	+	==Antibodies that engage the hemagglutinin receptor-binding site of influenza B viruses==
-	<StructureSection load='7kqi' size='340' side='right'caption='[[7kqi]]' scene=''>	+	<StructureSection load='7kqi' size='340' side='right'caption='[[7kqi]], [[Resolution\|resolution]] 4.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7kqi]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Influenza_B_virus_(B/Yamagata/16/1988) Influenza B virus (B/Yamagata/16/1988)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7KQI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7KQI FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=7kqi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7kqi OCA], [~~http~~://pdbe.org/7kqi PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=7kqi RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/7kqi PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=7kqi ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 4.2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7kqi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7kqi OCA], [https://pdbe.org/7kqi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7kqi RCSB], [https://www.ebi.ac.uk/pdbsum/7kqi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7kqi ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/HEMA_INBYB HEMA_INBYB] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induce an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	We describe cross-reactive human antibodies recognizing influenza B viruses spanning nearly 80 years of antigenic drift. Structures show that they engage the receptor-binding site (RBS) of the viral hemagglutinin with strong similarities to their influenza A counterparts, despite structural differences between the RBS of influenza A and B. Our data show that these antibodies readily cross-react with both influenza B Victoria and Yamagata lineages. We also note that all antibodies are encoded by IGHV3-9/IGK1-33. Future research will provide insight into the prevalence of these antibodies in the human population.
		+
		+	Antibodies That Engage the Hemagglutinin Receptor-Binding Site of Influenza B Viruses.,Bajic G, Harrison SC ACS Infect Dis. 2021 Jan 8;7(1):1-5. doi: 10.1021/acsinfecdis.0c00726. Epub 2020 , Dec 4. PMID:33274930<ref>PMID:33274930</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7kqi" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Antibody 3D structures\|Antibody 3D structures]]
		+	*[[Hemagglutinin 3D structures\|Hemagglutinin 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Z-disk~~]]	+	[[Category: Bajic G]]
		+	[[Category: Harrison SC]]

OCA at 12:37, 16 December 2020

OCA — Wed, 16 Dec 2020 12:37:20 GMT

←Older revision		Revision as of 12:37, 16 December 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 7kqi ~~is ON HOLD~~	+	====
-		+	<StructureSection load='7kqi' size='340' side='right'caption='[[7kqi]]' scene=''>
-	~~Authors~~: ~~Bajic, G~~.~~, Harrison, S~~.C.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
-	~~Description~~: ~~Antibodies that engage the hemagglutinin receptor~~-~~binding site of influenza B viruses~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7kqi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7kqi OCA], [http://pdbe.org/7kqi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7kqi RCSB], [http://www.ebi.ac.uk/pdbsum/7kqi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7kqi ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</table>
-	[[Category: ~~Harrison, S.C~~]]	+	__TOC__
-	[[Category: ~~Bajic, G~~]]	+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Z-disk]]

OCA: Protected "7kqi" [edit=sysop:move=sysop]

OCA — Wed, 25 Nov 2020 05:33:13 GMT

Protected "7kqi" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:33, 25 November 2020

OCA: New page: '''Unreleased structure''' The entry 7kqi is ON HOLD Authors: Bajic, G., Harrison, S.C. Description: Antibodies that engage the hemagglutinin receptor-binding site of influenza B virus...

OCA — Wed, 25 Nov 2020 05:33:12 GMT

New page: '''Unreleased structure''' The entry 7kqi is ON HOLD Authors: Bajic, G., Harrison, S.C. Description: Antibodies that engage the hemagglutinin receptor-binding site of influenza B virus...

New page

'''Unreleased structure'''

The entry 7kqi is ON HOLD

Authors: Bajic, G., Harrison, S.C.

Description: Antibodies that engage the hemagglutinin receptor-binding site of influenza B viruses
[[Category: Unreleased Structures]]
[[Category: Harrison, S.C]]
[[Category: Bajic, G]]

7kqi - Revision history

OCA at 15:30, 18 October 2023

OCA at 12:37, 16 December 2020

OCA: Protected "7kqi" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 7kqi is ON HOLD Authors: Bajic, G., Harrison, S.C. Description: Antibodies that engage the hemagglutinin receptor-binding site of influenza B virus...