7p8b - Revision history

OCA at 07:54, 7 February 2024

OCA — Wed, 07 Feb 2024 07:54:19 GMT

←Older revision		Revision as of 07:54, 7 February 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[7p8b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6ym6 6ym6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P8B FirstGlance]. <br>		<table><tr><td colspan='2'>[[7p8b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6ym6 6ym6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P8B FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OYT:9-cyclopropyl-~{N}-methyl-purin-6-amine'>OYT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OYT:9-cyclopropyl-~{N}-methyl-purin-6-amine'>OYT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p8b OCA], [https://pdbe.org/7p8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p8b RCSB], [https://www.ebi.ac.uk/pdbsum/7p8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p8b ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p8b OCA], [https://pdbe.org/7p8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p8b RCSB], [https://www.ebi.ac.uk/pdbsum/7p8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p8b ProSAT]</span></td></tr>
	</table>		</table>

OCA at 10:17, 15 February 2023

OCA — Wed, 15 Feb 2023 10:17:26 GMT

←Older revision		Revision as of 10:17, 15 February 2023
Line 3:		Line 3:
	<StructureSection load='7p8b' size='340' side='right'caption='[[7p8b]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='7p8b' size='340' side='right'caption='[[7p8b]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[7p8b]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P8B FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7p8b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6ym6 6ym6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P8B FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OYT:9-cyclopropyl-~{N}-methyl-purin-6-amine'>OYT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OYT:9-cyclopropyl-~{N}-methyl-purin-6-amine'>OYT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p8b OCA], [https://pdbe.org/7p8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p8b RCSB], [https://www.ebi.ac.uk/pdbsum/7p8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p8b ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p8b OCA], [https://pdbe.org/7p8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p8b RCSB], [https://www.ebi.ac.uk/pdbsum/7p8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p8b ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/YTDC1_HUMAN YTDC1_HUMAN]] RNA-binding protein that regulates alternative splice site selection.<ref>PMID:20167602</ref>	+	[https://www.uniprot.org/uniprot/YTDC1_HUMAN YTDC1_HUMAN] RNA-binding protein that regulates alternative splice site selection.<ref>PMID:20167602</ref>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bedi~~, R K~~]]	+	[[Category: Bedi RK]]
-	[[Category: Caflisch, A]]	+	[[Category: Caflisch A]]
-	[[Category: Dolbois, A]]	+	[[Category: Dolbois A]]
-	[[Category: Li, Y]]	+	[[Category: Li Y]]
-	~~[[Category: Complex]]~~	+
-	~~[[Category: Inhibitor]]~~	+
-	~~[[Category: M6a]]~~	+
-	~~[[Category: Rna binding protein]]~~	+
-	~~[[Category: Ythdc1~~]]	+

OCA at 11:51, 27 April 2022

OCA — Wed, 27 Apr 2022 11:51:15 GMT

←Older revision		Revision as of 11:51, 27 April 2022
Line 1:		Line 1:

	==Crystal structure of YTHDC1 with compound YLI_DC1_006==		==Crystal structure of YTHDC1 with compound YLI_DC1_006==
-	<StructureSection load='7p8b' size='340' side='right'caption='[[7p8b]]' scene=''>	+	<StructureSection load='7p8b' size='340' side='right'caption='[[7p8b]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P8B FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7p8b]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P8B FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p8b OCA], [https://pdbe.org/7p8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p8b RCSB], [https://www.ebi.ac.uk/pdbsum/7p8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p8b ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OYT:9-cyclopropyl-~{N}-methyl-purin-6-amine'>OYT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p8b OCA], [https://pdbe.org/7p8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p8b RCSB], [https://www.ebi.ac.uk/pdbsum/7p8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p8b ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/YTDC1_HUMAN YTDC1_HUMAN]] RNA-binding protein that regulates alternative splice site selection.<ref>PMID:20167602</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bedi RK]]	+	[[Category: Bedi, R K]]
-	[[Category: Caflisch A]]	+	[[Category: Caflisch, A]]
-	[[Category: Dolbois A]]	+	[[Category: Dolbois, A]]
-	[[Category: Li Y]]	+	[[Category: Li, Y]]
		+	[[Category: Complex]]
		+	[[Category: Inhibitor]]
		+	[[Category: M6a]]
		+	[[Category: Rna binding protein]]
		+	[[Category: Ythdc1]]

OCA at 16:32, 20 October 2021

OCA — Wed, 20 Oct 2021 16:32:01 GMT

←Older revision		Revision as of 16:32, 20 October 2021
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 7p8b ~~is ON HOLD until Jul 21 2023~~	+	==Crystal structure of YTHDC1 with compound YLI_DC1_006==
-		+	<StructureSection load='7p8b' size='340' side='right'caption='[[7p8b]]' scene=''>
-	~~Authors~~: ~~Bedi~~, R.K., Li, Y., ~~Dolbois, A~~., ~~Caflisch, A~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P8B FirstGlance]. <br>
-	~~Description: Crystal structure of YTHDC1 with compound YLI_DC1_006~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p8b OCA], [https://pdbe.org/7p8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p8b RCSB], [https://www.ebi.ac.uk/pdbsum/7p8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p8b ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
-	[[Category: ~~Dolbois, A~~]]	+	__TOC__
-	[[Category: Caflisch, A]]	+	</StructureSection>
-	[[Category: ~~Bedi, R.K~~]]	+	[[Category: Large Structures]]
-	[[Category: Li, Y]]	+	[[Category: Bedi RK]]
		+	[[Category: Caflisch A]]
		+	[[Category: Dolbois A]]
		+	[[Category: Li Y]]

OCA at 04:59, 18 August 2021

OCA — Wed, 18 Aug 2021 04:59:55 GMT

←Older revision		Revision as of 04:59, 18 August 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7p8b is ON HOLD	+	The entry 7p8b is ON HOLD until Jul 21 2023

	Authors: Bedi, R.K., Li, Y., Dolbois, A., Caflisch, A.		Authors: Bedi, R.K., Li, Y., Dolbois, A., Caflisch, A.
Line 7:		Line 7:
	Description: Crystal structure of YTHDC1 with compound YLI_DC1_006		Description: Crystal structure of YTHDC1 with compound YLI_DC1_006
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Li, Y]]	+	[[Category: Dolbois, A]]
	[[Category: Caflisch, A]]		[[Category: Caflisch, A]]
	[[Category: Bedi, R.K]]		[[Category: Bedi, R.K]]
-	[[Category: ~~Dolbois~~, A]]	+	[[Category: Li, Y]]

OCA: Protected "7p8b" [edit=sysop:move=sysop]

OCA — Wed, 28 Jul 2021 09:32:34 GMT

Protected "7p8b" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:32, 28 July 2021

OCA: New page: '''Unreleased structure''' The entry 7p8b is ON HOLD Authors: Bedi, R.K., Li, Y., Dolbois, A., Caflisch, A. Description: Crystal structure of YTHDC1 with compound YLI_DC1_006 [[Categor...

OCA — Wed, 28 Jul 2021 09:32:33 GMT

New page: '''Unreleased structure''' The entry 7p8b is ON HOLD Authors: Bedi, R.K., Li, Y., Dolbois, A., Caflisch, A. Description: Crystal structure of YTHDC1 with compound YLI_DC1_006 [[Categor...

New page

'''Unreleased structure'''

The entry 7p8b is ON HOLD

Authors: Bedi, R.K., Li, Y., Dolbois, A., Caflisch, A.

Description: Crystal structure of YTHDC1 with compound YLI_DC1_006
[[Category: Unreleased Structures]]
[[Category: Li, Y]]
[[Category: Caflisch, A]]
[[Category: Bedi, R.K]]
[[Category: Dolbois, A]]