OCA at 10:24, 24 November 2022

OCA — Thu, 24 Nov 2022 10:24:55 GMT

←Older revision		Revision as of 10:24, 24 November 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 7qvp is ~~ON HOLD until Paper~~ Publication	+	==Human collided disome (di-ribosome) stalled on XBP1 mRNA==
		+	<StructureSection load='7qvp' size='340' side='right'caption='[[7qvp]], [[Resolution\|resolution]] 3.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[7qvp]] is a 17 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7QVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7QVP FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7qvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7qvp OCA], [https://pdbe.org/7qvp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7qvp RCSB], [https://www.ebi.ac.uk/pdbsum/7qvp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7qvp ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A8B8VPA8_BALMU A0A8B8VPA8_BALMU]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Translational stalling events that result in ribosome collisions induce Ribosome-associated Quality Control (RQC) in order to degrade potentially toxic truncated nascent proteins. For RQC induction, the collided ribosomes are first marked by the Hel2/ZNF598 E3 ubiquitin ligase to recruit the RQT complex for subunit dissociation. In yeast, uS10 is polyubiquitinated by Hel2, whereas eS10 is preferentially monoubiquitinated by ZNF598 in human cells for an unknown reason. Here, we characterize the ubiquitination activity of ZNF598 and its importance for human RQT-mediated subunit dissociation using the endogenous XBP1u and poly(A) translation stallers. Cryo-EM analysis of a human collided disome reveals a distinct composite interface, with substantial differences to yeast collided disomes. Biochemical analysis of collided ribosomes shows that ZNF598 forms K63-linked polyubiquitin chains on uS10, which are decisive for mammalian RQC initiation. The human RQT (hRQT) complex composed only of ASCC3, ASCC2 and TRIP4 dissociates collided ribosomes dependent on the ATPase activity of ASCC3 and the ubiquitin-binding capacity of ASCC2. The hRQT-mediated subunit dissociation requires the K63-linked polyubiquitination of uS10, while monoubiquitination of eS10 or uS10 is not sufficient. Therefore, we conclude that ZNF598 functionally marks collided mammalian ribosomes by K63-linked polyubiquitination of uS10 for the trimeric hRQT complex-mediated subunit dissociation.

-	~~Authors~~:	+	A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.,Narita M, Denk T, Matsuo Y, Sugiyama T, Kikuguchi C, Ito S, Sato N, Suzuki T, Hashimoto S, Machova I, Tesina P, Beckmann R, Inada T Nat Commun. 2022 Oct 27;13(1):6411. doi: 10.1038/s41467-022-34097-9. PMID:36302773<ref>PMID:36302773</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 7qvp" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Homo sapiens]]
		+	[[Category: Large Structures]]
		+	[[Category: Beckmann R]]
		+	[[Category: Denk TG]]
		+	[[Category: Tesina P]]

OCA at 16:17, 27 July 2022

OCA — Wed, 27 Jul 2022 16:17:40 GMT

←Older revision		Revision as of 16:17, 27 July 2022
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7qvp is ON HOLD	+	The entry 7qvp is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "7qvp" [edit=sysop:move=sysop]

OCA — Wed, 02 Feb 2022 05:27:12 GMT

Protected "7qvp" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:27, 2 February 2022

OCA: New page: '''Unreleased structure''' The entry 7qvp is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 02 Feb 2022 05:27:10 GMT

New page: '''Unreleased structure''' The entry 7qvp is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7qvp is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]

7qvp - Revision history

OCA at 10:24, 24 November 2022

OCA at 16:17, 27 July 2022

OCA: Protected "7qvp" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 7qvp is ON HOLD Authors: Description: Category: Unreleased Structures