7ruk - Revision history

OCA: Redirecting to 8tdp

OCA — Wed, 22 Nov 2023 07:22:15 GMT

Redirecting to 8tdp

←Older revision		Revision as of 07:22, 22 November 2023
Line 1:		Line 1:
-		+	#REDIRECT [[8tdp]] This PDB entry is obsolete and replaced by 8tdp
-	~~==XFEL structure of CYP121 bound with cYY soaked in peracetic acid for 200 ms==~~	+
-	~~<StructureSection load='7ruk' size='340' side='right'caption='~~[[~~7ruk]], [[Resolution\|resolution]] 1.85Å' scene=''>~~	+
-	~~== Structural highlights ==~~	+
-	~~<table><tr><td colspan='2'>[[7ruk~~]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RUK FirstGlance]. <br>	+
-	~~</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.85Å</td></tr>~~	+
-	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=YTT:(3S,6S)-3,6-BIS(4-HYDROXYBENZYL)PIPERAZINE-2,5-DIONE'>YTT</scene></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ruk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ruk OCA], [https://pdbe.org/7ruk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ruk RCSB], [https://www.ebi.ac.uk/pdbsum/7ruk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ruk ProSAT]</span></td></tr>	+
-	~~</table>~~	+
-	~~== Function ==~~	+
-	[https://www.uniprot.org/uniprot/CP121_MYCTO CP121_MYCTO] Catalyzes C-C bond formation between the carbons ortho to the phenolic hydroxyl of cyclo(L-tyr-L-tyr) (cYY) producing mycocyclosin. Can also use cyclo(L-Tyr-L-Phe) (cYF), cyclo(L-Tyr-L-Trp) (cYW) and ~~cyclo(L-Tyr-L-3,4-dihydroxyphenylalanine) (cY-DOPA) as substrate (By similarity).~~	+
-	~~__TOC__~~	+
-	~~</StructureSection>~~	+
-	~~[[Category: Large Structures]]~~	+
-	~~[[Category: Mycobacterium tuberculosis]]~~	+
-	~~[[Category: Dasgupta M]]~~	+
-	~~[[Category: Nguyen RC]]~~	+

OCA at 09:30, 25 October 2023

OCA — Wed, 25 Oct 2023 09:30:45 GMT

←Older revision		Revision as of 09:30, 25 October 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[7ruk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RUK FirstGlance]. <br>		<table><tr><td colspan='2'>[[7ruk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RUK FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=YTT:(3S,6S)-3,6-BIS(4-HYDROXYBENZYL)PIPERAZINE-2,5-DIONE'>YTT</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.85Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=YTT:(3S,6S)-3,6-BIS(4-HYDROXYBENZYL)PIPERAZINE-2,5-DIONE'>YTT</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ruk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ruk OCA], [https://pdbe.org/7ruk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ruk RCSB], [https://www.ebi.ac.uk/pdbsum/7ruk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ruk ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ruk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ruk OCA], [https://pdbe.org/7ruk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ruk RCSB], [https://www.ebi.ac.uk/pdbsum/7ruk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ruk ProSAT]</span></td></tr>
	</table>		</table>

OCA at 10:20, 15 February 2023

OCA — Wed, 15 Feb 2023 10:20:09 GMT

←Older revision		Revision as of 10:20, 15 February 2023
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 7ruk is ~~ON HOLD until Paper Publication~~	+	==XFEL structure of CYP121 bound with cYY soaked in peracetic acid for 200 ms==
-		+	<StructureSection load='7ruk' size='340' side='right'caption='[[7ruk]], [[Resolution\|resolution]] 1.85Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[7ruk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RUK FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=YTT:(3S,6S)-3,6-BIS(4-HYDROXYBENZYL)PIPERAZINE-2,5-DIONE'>YTT</scene></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ruk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ruk OCA], [https://pdbe.org/7ruk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ruk RCSB], [https://www.ebi.ac.uk/pdbsum/7ruk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ruk ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/CP121_MYCTO CP121_MYCTO] Catalyzes C-C bond formation between the carbons ortho to the phenolic hydroxyl of cyclo(L-tyr-L-tyr) (cYY) producing mycocyclosin. Can also use cyclo(L-Tyr-L-Phe) (cYF), cyclo(L-Tyr-L-Trp) (cYW) and cyclo(L-Tyr-L-3,4-dihydroxyphenylalanine) (cY-DOPA) as substrate (By similarity).
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Mycobacterium tuberculosis]]
		+	[[Category: Dasgupta M]]
		+	[[Category: Nguyen RC]]

OCA at 03:49, 8 June 2022

OCA — Wed, 08 Jun 2022 03:49:08 GMT

←Older revision		Revision as of 03:49, 8 June 2022
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7ruk is ON HOLD	+	The entry 7ruk is ON HOLD until Paper Publication

	Authors:		Authors:

OCA at 11:27, 4 May 2022

OCA — Wed, 04 May 2022 11:27:26 GMT

←Older revision		Revision as of 11:27, 4 May 2022
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7ruk is ON HOLD ~~until Paper Publication~~	+	The entry 7ruk is ON HOLD

	Authors:		Authors:

OCA at 05:35, 22 September 2021

OCA — Wed, 22 Sep 2021 05:35:19 GMT

←Older revision		Revision as of 05:35, 22 September 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7ruk is ON HOLD	+	The entry 7ruk is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "7ruk" [edit=sysop:move=sysop]

OCA — Wed, 25 Aug 2021 05:18:47 GMT

Protected "7ruk" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:18, 25 August 2021

OCA: New page: '''Unreleased structure''' The entry 7ruk is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 25 Aug 2021 05:18:46 GMT

New page: '''Unreleased structure''' The entry 7ruk is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7ruk is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]