OCA at 17:15, 18 October 2023

OCA — Wed, 18 Oct 2023 17:15:15 GMT

←Older revision		Revision as of 17:15, 18 October 2023
Line 1:		Line 1:

-	====	+	==Crystal structure of liganded Hb with the 5-HMF analog, MMA503==
-	<StructureSection load='7uf7' size='340' side='right'caption='[[7uf7]]' scene=''>	+	<StructureSection load='7uf7' size='340' side='right'caption='[[7uf7]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7uf7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7UF7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7UF7 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7uf7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7uf7 OCA], [https://pdbe.org/7uf7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7uf7 RCSB], [https://www.ebi.ac.uk/pdbsum/7uf7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7uf7 ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=N2Q:(5P)-5-(5-methylfuran-2-yl)-1H-pyrazole'>N2Q</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7uf7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7uf7 OCA], [https://pdbe.org/7uf7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7uf7 RCSB], [https://www.ebi.ac.uk/pdbsum/7uf7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7uf7 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Disease ==
		+	[https://www.uniprot.org/uniprot/HBA_HUMAN HBA_HUMAN] Defects in HBA1 may be a cause of Heinz body anemias (HEIBAN) [MIM:[https://omim.org/entry/140700 140700]. This is a form of non-spherocytic hemolytic anemia of Dacie type 1. After splenectomy, which has little benefit, basophilic inclusions called Heinz bodies are demonstrable in the erythrocytes. Before splenectomy, diffuse or punctate basophilia may be evident. Most of these cases are probably instances of hemoglobinopathy. The hemoglobin demonstrates heat lability. Heinz bodies are observed also with the Ivemark syndrome (asplenia with cardiovascular anomalies) and with glutathione peroxidase deficiency.<ref>PMID:2833478</ref> Defects in HBA1 are the cause of alpha-thalassemia (A-THAL) [MIM:[https://omim.org/entry/604131 604131]. The thalassemias are the most common monogenic diseases and occur mostly in Mediterranean and Southeast Asian populations. The hallmark of alpha-thalassemia is an imbalance in globin-chain production in the adult HbA molecule. The level of alpha chain production can range from none to very nearly normal levels. Deletion of both copies of each of the two alpha-globin genes causes alpha(0)-thalassemia, also known as homozygous alpha thalassemia. Due to the complete absence of alpha chains, the predominant fetal hemoglobin is a tetramer of gamma-chains (Bart hemoglobin) that has essentially no oxygen carrying capacity. This causes oxygen starvation in the fetal tissues leading to prenatal lethality or early neonatal death. The loss of three alpha genes results in high levels of a tetramer of four beta chains (hemoglobin H), causing a severe and life-threatening anemia known as hemoglobin H disease. Untreated, most patients die in childhood or early adolescence. The loss of two alpha genes results in mild alpha-thalassemia, also known as heterozygous alpha-thalassemia. Affected individuals have small red cells and a mild anemia (microcytosis). If three of the four alpha-globin genes are functional, individuals are completely asymptomatic. Some rare forms of alpha-thalassemia are due to point mutations (non-deletional alpha-thalassemia). The thalassemic phenotype is due to unstable globin alpha chains that are rapidly catabolized prior to formation of the alpha-beta heterotetramers. Note=Alpha(0)-thalassemia is associated with non-immune hydrops fetalis, a generalized edema of the fetus with fluid accumulation in the body cavities due to non-immune causes. Non-immune hydrops fetalis is not a diagnosis in itself but a symptom, a feature of many genetic disorders, and the end-stage of a wide variety of disorders. Defects in HBA1 are the cause of hemoglobin H disease (HBH) [MIM:[https://omim.org/entry/613978 613978]. HBH is a form of alpha-thalassemia due to the loss of three alpha genes. This results in high levels of a tetramer of four beta chains (hemoglobin H), causing a severe and life-threatening anemia. Untreated, most patients die in childhood or early adolescence.<ref>PMID:10569720</ref>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/HBA_HUMAN HBA_HUMAN] Involved in oxygen transport from the lung to the various peripheral tissues.
		+
		+	==See Also==
		+	*[[Hemoglobin 3D structures\|Hemoglobin 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Z-disk~~]]	+	[[Category: Donkor AK]]
		+	[[Category: Musayev FN]]
		+	[[Category: Safo MK]]

OCA: Protected "7uf7" [edit=sysop:move=sysop]

OCA — Wed, 30 Mar 2022 10:48:47 GMT

Protected "7uf7" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:48, 30 March 2022

OCA: New page: ==== == Structural highlights ==
Full crystallographic information is availabl...
OCA — Wed, 30 Mar 2022 10:48:46 GMT

New page: ==== <StructureSection load='7uf7' size='340' side='right'caption='7uf7' scene=''> == Structural highlights == <table><tr><td colspan='2'>Full crystallographic information is availabl...

New page

====
<StructureSection load='7uf7' size='340' side='right'caption='[[7uf7]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7uf7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7uf7 OCA], [https://pdbe.org/7uf7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7uf7 RCSB], [https://www.ebi.ac.uk/pdbsum/7uf7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7uf7 ProSAT]</span></td></tr>
</table>
TOC
</StructureSection>
[[Category: Large Structures]]
[[Category: Z-disk]]

7uf7 - Revision history

OCA at 17:15, 18 October 2023

OCA: Protected "7uf7" [edit=sysop:move=sysop]