7vyt - Revision history

OCA at 17:34, 29 November 2023

OCA — Wed, 29 Nov 2023 17:34:07 GMT

←Older revision		Revision as of 17:34, 29 November 2023
Line 1:		Line 1:

-	====	+	==Crystal structure of human TIGIT(23-129) in complex with the scFv fragment of anti-TIGIT antibody MG1131==
-	<StructureSection load='7vyt' size='340' side='right'caption='[[7vyt]]' scene=''>	+	<StructureSection load='7vyt' size='340' side='right'caption='[[7vyt]], [[Resolution\|resolution]] 1.53Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7vyt]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VYT FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vyt OCA], [https://pdbe.org/7vyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vyt RCSB], [https://www.ebi.ac.uk/pdbsum/7vyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vyt ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.53Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vyt OCA], [https://pdbe.org/7vyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vyt RCSB], [https://www.ebi.ac.uk/pdbsum/7vyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vyt ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/TIGIT_HUMAN TIGIT_HUMAN] Binds with high affinity to the poliovirus receptor (PVR) which causes increased secretion of IL10 and decreased secretion of IL12B and suppresses T-cell activation by promoting the generation of mature immunoregulatory dendritic cells.
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	TIGIT is an immune checkpoint receptor that is expressed on subsets of activated T cells and natural killer (NK) cells. Several ligands for TIGIT, including poliovirus receptor (PVR), are expressed on cancer cells and mediate inhibitory signaling to suppress antitumor activities of the immune cells. Many studies support that the TIGIT signaling is a potential target for cancer immunotherapy. We developed an IgG4-type monoclonal antibody against human TIGIT, designated as MG1131, using a phage display library of single-chain variable fragments (scFvs). MG1131 interacts with TIGIT much more tightly than PVR does. The crystal structure of a scFv version of MG1131 bound to TIGIT was determined, showing that MG1131 could block the PVR-TIGIT interaction and thus the immunosuppressive signaling of TIGIT. Consistently, MG1131 is bound to TIGIT-expressing cells and interferes with PVR binding to these cells. Moreover, MG1131 increased NK cell-mediated tumor killing activities, inhibited immunosuppressive activity of regulatory T (Treg) cells from healthy donors, and restored interferon-gamma secretion from peripheral blood mononuclear cells derived from multiple myeloma patients. MG1131 also increased T cell infiltration to the tumor site and inhibited tumor growth in mice. Collectively, these data indicate that MG1131 modulates the effector functions of T cells and NK cells positively and Treg cells negatively.
		+
		+	Structural and functional characterization of a monoclonal antibody blocking TIGIT.,Jeong BS, Nam H, Lee J, Park HY, Cho KJ, Sheen JH, Song E, Oh M, Lee S, Choi H, Yang JE, Kim M, Oh BH MAbs. 2022 Jan-Dec;14(1):2013750. doi: 10.1080/19420862.2021.2013750. PMID:35090381<ref>PMID:35090381</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7vyt" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Antibody 3D structures\|Antibody 3D structures]]
		+	*[[Monoclonal Antibodies 3D structures\|Monoclonal Antibodies 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Z-~~disk~~]]	+	[[Category: Jeong B-S]]
		+	[[Category: Kim M]]
		+	[[Category: Nam H]]
		+	[[Category: Oh B-H]]

OCA at 06:23, 2 March 2022

OCA — Wed, 02 Mar 2022 06:23:47 GMT

←Older revision		Revision as of 06:23, 2 March 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 7vyt ~~is ON HOLD~~	+	====
-		+	<StructureSection load='7vyt' size='340' side='right'caption='[[7vyt]]' scene=''>
-	~~Authors~~: ~~Jeong, B~~.-S.~~, Nam, H., Kim, M., Oh, B~~.-H.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
-	~~Description: Crystal structure of human TIGIT(23-129) in complex with~~ the ~~scFv fragment of anti-TIGIT antibody MG1131~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vyt OCA], [https://pdbe.org/7vyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vyt RCSB], [https://www.ebi.ac.uk/pdbsum/7vyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vyt ProSAT]</span></td></tr>
-	[~~[Category~~: ~~Unreleased Structures]~~]	+	</table>
-	[~~[Category~~: Oh, B.-H]]	+	__TOC__
-	[[~~Category~~: ~~Nam~~, H]]	+	</StructureSection>
-	[[Category: ~~Jeong, B.-S~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Kim, M~~]]	+	[[Category: Z-disk]]

OCA at 05:17, 1 December 2021

OCA — Wed, 01 Dec 2021 05:17:51 GMT

←Older revision		Revision as of 05:17, 1 December 2021
Line 5:		Line 5:
	Authors: Jeong, B.-S., Nam, H., Kim, M., Oh, B.-H.		Authors: Jeong, B.-S., Nam, H., Kim, M., Oh, B.-H.

-	Description: Crystal structure of human TIGIT(23-~~128~~) in complex with the scFv fragment of anti-TIGIT antibody MG1131	+	Description: Crystal structure of human TIGIT(23-129) in complex with the scFv fragment of anti-TIGIT antibody MG1131
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Jeong, B.-S]]
	[[Category: Oh, B.-H]]		[[Category: Oh, B.-H]]
-	[[Category: Kim, M]]
	[[Category: Nam, H]]		[[Category: Nam, H]]
		+	[[Category: Jeong, B.-S]]
		+	[[Category: Kim, M]]

OCA: Protected "7vyt" [edit=sysop:move=sysop]

OCA — Wed, 24 Nov 2021 11:07:25 GMT

Protected "7vyt" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:07, 24 November 2021

OCA: New page: '''Unreleased structure''' The entry 7vyt is ON HOLD Authors: Jeong, B.-S., Nam, H., Kim, M., Oh, B.-H. Description: Crystal structure of human TIGIT(23-128) in complex with the scFv f...

OCA — Wed, 24 Nov 2021 11:07:23 GMT

New page: '''Unreleased structure''' The entry 7vyt is ON HOLD Authors: Jeong, B.-S., Nam, H., Kim, M., Oh, B.-H. Description: Crystal structure of human TIGIT(23-128) in complex with the scFv f...

New page

'''Unreleased structure'''

The entry 7vyt is ON HOLD

Authors: Jeong, B.-S., Nam, H., Kim, M., Oh, B.-H.

Description: Crystal structure of human TIGIT(23-128) in complex with the scFv fragment of anti-TIGIT antibody MG1131
[[Category: Unreleased Structures]]
[[Category: Jeong, B.-S]]
[[Category: Oh, B.-H]]
[[Category: Kim, M]]
[[Category: Nam, H]]