7weg - Revision history

OCA at 17:40, 29 November 2023

OCA — Wed, 29 Nov 2023 17:40:11 GMT

←Older revision		Revision as of 17:40, 29 November 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[7weg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7WEG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7WEG FirstGlance]. <br>		<table><tr><td colspan='2'>[[7weg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7WEG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7WEG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7weg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7weg OCA], [https://pdbe.org/7weg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7weg RCSB], [https://www.ebi.ac.uk/pdbsum/7weg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7weg ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7weg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7weg OCA], [https://pdbe.org/7weg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7weg RCSB], [https://www.ebi.ac.uk/pdbsum/7weg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7weg ProSAT]</span></td></tr>
	</table>		</table>

OCA at 20:07, 16 November 2022

OCA — Wed, 16 Nov 2022 20:07:02 GMT

←Older revision		Revision as of 20:07, 16 November 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 7weg is ~~ON HOLD until Paper~~ Publication	+	==Complex structure of PDZD7 and FCHSD2==
		+	<StructureSection load='7weg' size='340' side='right'caption='[[7weg]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[7weg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7WEG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7WEG FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7weg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7weg OCA], [https://pdbe.org/7weg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7weg RCSB], [https://www.ebi.ac.uk/pdbsum/7weg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7weg ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/PDZD7_MOUSE PDZD7_MOUSE] In cochlear developing hair cells, essential in organizing the USH2 complex at stereocilia ankle links (PubMed:24334608). Blocks inhibition of adenylate cyclase activity mediated by ADGRV1 (PubMed:24962568).<ref>PMID:24334608</ref> <ref>PMID:24962568</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	In cochlea, deafness-related protein PDZD7 is an indispensable component of the ankle link complex, which is critical for the maturation of inner-ear hair cell for sound perception. Ankle links, connecting the different rows of cochlear stereocilia, are essential for the staircase-like development of stereocilia. However, the molecular mechanism of how PDZD7 governs stereociliary development remains unknown. Here, we reported a novel PDZD7-binding partner, FCHSD2, identified by yeast two-hybrid screening. FCHSD2 was reported to be expressed in hair cell, where it co-operated with CDC42 and N-WASP to regulate the formation of cell protrusion. The association between FCHSD2 and PDZD7 was further confirmed in COS-7 cells. More importantly, we solved the complex structure of FCHSD2 tail with PDZD7 PDZ3 domain at 2.0 A resolution. The crystal structure shows that PDZD7 PDZ3 adopts a typical PDZ domain topology, comprising five beta strands and two alpha helixes. The PDZ-binding motif of FCHSD2 tail stretches through the alphaB/betaB groove of PDZD7 PDZ3. Our study not only uncovers the interaction between FCHSD2 tail and PDZD7 PDZ3 at the atomic level, but also provides clues of connecting the ankle link complex with cytoskeleton dynamics for exploiting the molecular mechanism of stereociliary development.

-	~~Authors~~:	+	Deafness-related protein PDZD7 forms complex with the C-terminal tail of FCHSD2.,Wang H, Zhao D, Du H, Zhai X, Wu S, Lin L, Xu Z, Lu Q Biochem J. 2022 Jun 30;479(12):1393-1405. doi: 10.1042/BCJ20220147. PMID:35695292<ref>PMID:35695292</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 7weg" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Mus musculus]]
		+	[[Category: Lin L]]
		+	[[Category: Lu Q]]
		+	[[Category: Wang H]]

OCA at 06:24, 9 February 2022

OCA — Wed, 09 Feb 2022 06:24:49 GMT

←Older revision		Revision as of 06:24, 9 February 2022
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7weg is ON HOLD	+	The entry 7weg is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "7weg" [edit=sysop:move=sysop]

OCA — Wed, 29 Dec 2021 12:43:37 GMT

Protected "7weg" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:43, 29 December 2021

OCA: New page: '''Unreleased structure''' The entry 7weg is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 29 Dec 2021 12:43:36 GMT

New page: '''Unreleased structure''' The entry 7weg is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7weg is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]