OCA at 10:07, 14 December 2022

OCA — Wed, 14 Dec 2022 10:07:59 GMT

←Older revision		Revision as of 10:07, 14 December 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 8a06 is ~~ON HOLD until Paper~~ Publication	+	==Flavobacterium infecting lipid-containing phage FLiP penton protein==
		+	<StructureSection load='8a06' size='340' side='right'caption='[[8a06]], [[Resolution\|resolution]] 4.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8a06]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Flavobacterium_phage_FLiP Flavobacterium phage FLiP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8A06 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8A06 FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8a06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8a06 OCA], [https://pdbe.org/8a06 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8a06 RCSB], [https://www.ebi.ac.uk/pdbsum/8a06 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8a06 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A222NP85_9VIRU A0A222NP85_9VIRU]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The origin of viruses remains an open question. While lack of detectable sequence similarity hampers the analysis of distantly related viruses, structural biology investigations of conserved capsid protein structures facilitate the study of distant evolutionary relationships. Here we characterize the lipid-containing ssDNA temperate bacteriophage PhiCjT23, which infects Flavobacterium sp. (Bacteroidetes). We report PhiCjT23-like sequences in the genome of strains belonging to several Flavobacterium species. The virion structure determined by cryogenic electron microscopy reveals similarities to members of the viral kingdom Bamfordvirae that currently consists solely of dsDNA viruses with a major capsid protein composed of two upright beta-sandwiches. The minimalistic structure of PhiCjT23 suggests that this phage serves as a model for the last common ancestor between ssDNA and dsDNA viruses in the Bamfordvirae. Both PhiCjT23 and the related phage FLiP infect Flavobacterium species found in several environments, suggesting that these types of viruses have a global distribution and a shared evolutionary origin. Detailed comparisons to related, more complex viruses not only expand our knowledge about this group of viruses but also provide a rare glimpse into early virus evolution.

-	~~Authors: Rissanen~~, I., ~~Huiskonen~~, J.T.	+	Cryo-EM structure of ssDNA bacteriophage PhiCjT23 provides insight into early virus evolution.,Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT Nat Commun. 2022 Dec 3;13(1):7478. doi: 10.1038/s41467-022-35123-6. PMID:36463224<ref>PMID:36463224</ref>

-	~~Description~~: Flavobacterium ~~infecting lipid-containing~~ phage FLiP ~~penton protein~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
-	[[Category: ~~Rissanen, I~~]]	+	<div class="pdbe-citations 8a06" style="background-color:#fffaf0;"></div>
-	[[Category: ~~Huiskonen, J.T~~]]	+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Flavobacterium phage FLiP]]
		+	[[Category: Large Structures]]
		+	[[Category: Huiskonen JT]]
		+	[[Category: Rissanen I]]

OCA at 06:19, 29 June 2022

OCA — Wed, 29 Jun 2022 06:19:21 GMT

←Older revision		Revision as of 06:19, 29 June 2022
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8a06 is ON HOLD	+	The entry 8a06 is ON HOLD until Paper Publication

	Authors: Rissanen, I., Huiskonen, J.T.		Authors: Rissanen, I., Huiskonen, J.T.

OCA: Protected "8a06" [edit=sysop:move=sysop]

OCA — Wed, 08 Jun 2022 04:20:45 GMT

Protected "8a06" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:20, 8 June 2022

OCA: New page: '''Unreleased structure''' The entry 8a06 is ON HOLD Authors: Rissanen, I., Huiskonen, J.T. Description: Flavobacterium infecting lipid-containing phage FLiP penton protein [[Category:...

OCA — Wed, 08 Jun 2022 04:20:44 GMT

New page: '''Unreleased structure''' The entry 8a06 is ON HOLD Authors: Rissanen, I., Huiskonen, J.T. Description: Flavobacterium infecting lipid-containing phage FLiP penton protein [[Category:...

New page

'''Unreleased structure'''

The entry 8a06 is ON HOLD

Authors: Rissanen, I., Huiskonen, J.T.

Description: Flavobacterium infecting lipid-containing phage FLiP penton protein
[[Category: Unreleased Structures]]
[[Category: Rissanen, I]]
[[Category: Huiskonen, J.T]]

8a06 - Revision history

OCA at 10:07, 14 December 2022

OCA at 06:19, 29 June 2022

OCA: Protected "8a06" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8a06 is ON HOLD Authors: Rissanen, I., Huiskonen, J.T. Description: Flavobacterium infecting lipid-containing phage FLiP penton protein [[Category:...