8dk9 - Revision history

OCA at 10:10, 25 October 2023

OCA — Wed, 25 Oct 2023 10:10:47 GMT

←Older revision		Revision as of 10:10, 25 October 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[8dk9]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis] and [https://en.wikipedia.org/wiki/Mycolicibacterium_thermoresistibile Mycolicibacterium thermoresistibile]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DK9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DK9 FirstGlance]. <br>		<table><tr><td colspan='2'>[[8dk9]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis] and [https://en.wikipedia.org/wiki/Mycolicibacterium_thermoresistibile Mycolicibacterium thermoresistibile]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DK9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DK9 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8dk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8dk9 OCA], [https://pdbe.org/8dk9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8dk9 RCSB], [https://www.ebi.ac.uk/pdbsum/8dk9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8dk9 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8dk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8dk9 OCA], [https://pdbe.org/8dk9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8dk9 RCSB], [https://www.ebi.ac.uk/pdbsum/8dk9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8dk9 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:32, 18 January 2023

OCA — Wed, 18 Jan 2023 07:32:33 GMT

←Older revision		Revision as of 07:32, 18 January 2023
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-	'''Unreleased structure'''

-	~~The entry~~ 8dk9 is ~~ON HOLD until 2024~~-~~01-05~~	+	==Sliding-clamp-DinX peptide==
-		+	<StructureSection load='8dk9' size='340' side='right'caption='[[8dk9]], [[Resolution\|resolution]] 2.50Å' scene=''>
-	~~Authors~~: ~~Kapur~~, M.K., ~~Gray~~, O.J., ~~Honzatko, R~~.H., ~~Nelson, S~~.N.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[8dk9]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis] and [https://en.wikipedia.org/wiki/Mycolicibacterium_thermoresistibile Mycolicibacterium thermoresistibile]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DK9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DK9 FirstGlance]. <br>
-	~~Description~~: ~~Sliding-~~clamp-~~DinX peptide~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8dk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8dk9 OCA], [https://pdbe.org/8dk9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8dk9 RCSB], [https://www.ebi.ac.uk/pdbsum/8dk9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8dk9 ProSAT]</span></td></tr>
-	[[Category: ~~Honzatko, R.H~~]]	+	</table>
-	[[Category: ~~Nelson, S.N~~]]	+	== Function ==
-	[[Category: Gray~~, O.J~~]]	+	[https://www.uniprot.org/uniprot/A0A100XCQ4_MYCTH A0A100XCQ4_MYCTH] Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.[PIRNR:PIRNR000804]
-	[[Category: Kapur~~, M.K~~]]	+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Mycobacterium tuberculosis]]
		+	[[Category: Mycolicibacterium thermoresistibile]]
		+	[[Category: Gray OJ]]
		+	[[Category: Honzatko RH]]
		+	[[Category: Kapur MK]]
		+	[[Category: Nelson SN]]

OCA at 16:43, 27 July 2022

OCA — Wed, 27 Jul 2022 16:43:07 GMT

←Older revision		Revision as of 16:43, 27 July 2022
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8dk9 is ON HOLD	+	The entry 8dk9 is ON HOLD until 2024-01-05

	Authors: Kapur, M.K., Gray, O.J., Honzatko, R.H., Nelson, S.N.		Authors: Kapur, M.K., Gray, O.J., Honzatko, R.H., Nelson, S.N.

OCA: Protected "8dk9" [edit=sysop:move=sysop]

OCA — Wed, 13 Jul 2022 04:17:05 GMT

Protected "8dk9" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:17, 13 July 2022

OCA: New page: '''Unreleased structure''' The entry 8dk9 is ON HOLD Authors: Kapur, M.K., Gray, O.J., Honzatko, R.H., Nelson, S.N. Description: Sliding-clamp-DinX peptide [[Category: Unreleased Struc...

OCA — Wed, 13 Jul 2022 04:17:04 GMT

New page: '''Unreleased structure''' The entry 8dk9 is ON HOLD Authors: Kapur, M.K., Gray, O.J., Honzatko, R.H., Nelson, S.N. Description: Sliding-clamp-DinX peptide [[Category: Unreleased Struc...

New page

'''Unreleased structure'''

The entry 8dk9 is ON HOLD

Authors: Kapur, M.K., Gray, O.J., Honzatko, R.H., Nelson, S.N.

Description: Sliding-clamp-DinX peptide
[[Category: Unreleased Structures]]
[[Category: Honzatko, R.H]]
[[Category: Nelson, S.N]]
[[Category: Gray, O.J]]
[[Category: Kapur, M.K]]