OCA at 19:36, 19 October 2022

OCA — Wed, 19 Oct 2022 19:36:29 GMT

←Older revision		Revision as of 19:36, 19 October 2022
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	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>	+	[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:49, 21 September 2022

OCA — Wed, 21 Sep 2022 07:49:35 GMT

←Older revision		Revision as of 07:49, 21 September 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 8e54 is ~~ON HOLD~~	+	==MicroED structure of triclinic lysozyme recorded on K3==
		+	<StructureSection load='8e54' size='340' side='right'caption='[[8e54]], [[Resolution\|resolution]] 1.20Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8e54]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8E54 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8E54 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8e54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8e54 OCA], [https://pdbe.org/8e54 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8e54 RCSB], [https://www.ebi.ac.uk/pdbsum/8e54 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8e54 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Microcrystal electron diffraction (MicroED) uses electron cryo-microscopy (cryo-EM) to collect diffraction data from small crystals during continuous rotation of the sample. As a result of advances in hardware as well as methods development, the data quality has continuously improved over the past decade, to the point where even macromolecular structures can be determined ab initio. Detectors suitable for electron diffraction should ideally have fast readout to record data in movie mode, and high sensitivity at low exposure rates to accurately report the intensities. Direct electron detectors are commonly used in cryo-EM imaging for their sensitivity and speed, but despite their availability are generally not used in diffraction. Primary concerns with diffraction experiments are the dynamic range and coincidence loss, which will corrupt the measurement if the flux exceeds the count rate of the detector. Here, we describe instrument setup and low-exposure MicroED data collection in electron-counting mode using K2 and K3 direct electron detectors and show that the integrated intensities can be effectively used to solve structures of two macromolecules between 1.2 A and 2.8 A. Even though a beam stop was not used in these studies we did not observe damage to the camera. As these cameras are already available in many cryo-EM facilities, this provides opportunities for users who do not have access to dedicated facilities for MicroED.

-	~~Authors~~:	+	Electron-counting MicroED data with the K2 and K3 direct electron detectors.,Clabbers MTB, Martynowycz MW, Hattne J, Nannenga BL, Gonen T J Struct Biol. 2022 Aug 28:107886. doi: 10.1016/j.jsb.2022.107886. PMID:36044956<ref>PMID:36044956</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 8e54" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Gallus gallus]]
		+	[[Category: Large Structures]]
		+	[[Category: Clabbers MTB]]
		+	[[Category: Gonen T]]
		+	[[Category: Hattne J]]
		+	[[Category: Martynowycz MW]]
		+	[[Category: Nannenga BL]]

OCA: Protected "8e54" [edit=sysop:move=sysop]

OCA — Wed, 31 Aug 2022 05:34:34 GMT

Protected "8e54" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:34, 31 August 2022

OCA: New page: '''Unreleased structure''' The entry 8e54 is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 31 Aug 2022 05:34:33 GMT

New page: '''Unreleased structure''' The entry 8e54 is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8e54 is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]

8e54 - Revision history

OCA at 19:36, 19 October 2022

OCA at 07:49, 21 September 2022

OCA: Protected "8e54" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8e54 is ON HOLD Authors: Description: Category: Unreleased Structures