8fc2 - Revision history

OCA at 11:34, 15 November 2023

OCA — Wed, 15 Nov 2023 11:34:49 GMT

←Older revision		Revision as of 11:34, 15 November 2023
Line 13:		Line 13:
	==See Also==		==See Also==
	*[[Ribosomal protein THX 3D structures\|Ribosomal protein THX 3D structures]]		*[[Ribosomal protein THX 3D structures\|Ribosomal protein THX 3D structures]]
		+	*[[Ribosome 3D structures\|Ribosome 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 10:32, 25 October 2023

OCA — Wed, 25 Oct 2023 10:32:16 GMT

←Older revision		Revision as of 10:32, 25 October 2023
Line 10:		Line 10:
	== Function ==		== Function ==
	[https://www.uniprot.org/uniprot/RL3_THET8 RL3_THET8] One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity).[HAMAP-Rule:MF_01325_B]		[https://www.uniprot.org/uniprot/RL3_THET8 RL3_THET8] One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity).[HAMAP-Rule:MF_01325_B]
		+
		+	==See Also==
		+	*[[Ribosomal protein THX 3D structures\|Ribosomal protein THX 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 07:20, 12 July 2023

OCA — Wed, 12 Jul 2023 07:20:27 GMT

←Older revision		Revision as of 07:20, 12 July 2023
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 8fc2 is ON HOLD~~	+	==Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution==
-		+	<StructureSection load='8fc2' size='340' side='right'caption='[[8fc2]], [[Resolution\|resolution]] 2.50Å' scene=''>
-	~~Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[8fc2]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8FC2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8FC2 FirstGlance]. <br>
-	~~Description:~~ Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0TD:(3S)-3-(METHYLSULFANYL)-L-ASPARTIC+ACID'>0TD</scene>, <scene name='pdbligand=2MA:2-METHYLADENOSINE-5-MONOPHOSPHATE'>2MA</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=2MU:2,5-DIMETHYLURIDINE-5-MONOPHOSPHATE'>2MU</scene>, <scene name='pdbligand=4OC:4N,O2-METHYLCYTIDINE-5-MONOPHOSPHATE'>4OC</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=ARG:ARGININE'>ARG</scene>, <scene name='pdbligand=G7M:N7-METHYL-GUANOSINE-5-MONOPHOSPHATE'>G7M</scene>, <scene name='pdbligand=HGR:HYGROMYCIN+A'>HGR</scene>, <scene name='pdbligand=M2G:N2-DIMETHYLGUANOSINE-5-MONOPHOSPHATE'>M2G</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=OMC:O2-METHYLYCYTIDINE-5-MONOPHOSPHATE'>OMC</scene>, <scene name='pdbligand=OMG:O2-METHYLGUANOSINE-5-MONOPHOSPHATE'>OMG</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene>, <scene name='pdbligand=ZIT:AZITHROMYCIN'>ZIT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	[[~~Category~~: ~~Polikanov~~, Y.S]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8fc2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8fc2 OCA], [https://pdbe.org/8fc2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8fc2 RCSB], [https://www.ebi.ac.uk/pdbsum/8fc2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8fc2 ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Syroegin~~, E.A]]	+	</table>
-	[[Category: Chen, C.-W]]	+	== Function ==
-	[[Category: Svetlov~~, M.S~~]]	+	[https://www.uniprot.org/uniprot/RL3_THET8 RL3_THET8] One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity).[HAMAP-Rule:MF_01325_B]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Thermus thermophilus HB8]]
		+	[[Category: Chen C-W]]
		+	[[Category: Polikanov YS]]
		+	[[Category: Svetlov MS]]
		+	[[Category: Syroegin EA]]

OCA: Protected "8fc2" [edit=sysop:move=sysop]

OCA — Wed, 07 Dec 2022 05:42:16 GMT

Protected "8fc2" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:42, 7 December 2022

OCA: New page: '''Unreleased structure''' The entry 8fc2 is ON HOLD Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S. Description: Crystal structure of the Thermus thermophilus 70S...

OCA — Wed, 07 Dec 2022 05:42:14 GMT

New page: '''Unreleased structure''' The entry 8fc2 is ON HOLD Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S. Description: Crystal structure of the Thermus thermophilus 70S...

New page

'''Unreleased structure'''

The entry 8fc2 is ON HOLD

Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.

Description: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution
[[Category: Unreleased Structures]]
[[Category: Polikanov, Y.S]]
[[Category: Syroegin, E.A]]
[[Category: Chen, C.-W]]
[[Category: Svetlov, M.S]]