8h65 - Revision history

OCA at 10:34, 25 October 2023

OCA — Wed, 25 Oct 2023 10:34:55 GMT

←Older revision		Revision as of 10:34, 25 October 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[8h65]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H65 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H65 FirstGlance]. <br>		<table><tr><td colspan='2'>[[8h65]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H65 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H65 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCO:BUTYRYL+COENZYME+A'>BCO</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCO:BUTYRYL+COENZYME+A'>BCO</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h65 OCA], [https://pdbe.org/8h65 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h65 RCSB], [https://www.ebi.ac.uk/pdbsum/8h65 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h65 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h65 OCA], [https://pdbe.org/8h65 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h65 RCSB], [https://www.ebi.ac.uk/pdbsum/8h65 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h65 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:33, 3 May 2023

OCA — Wed, 03 May 2023 07:33:20 GMT

←Older revision		Revision as of 07:33, 3 May 2023
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 8h65 is ~~ON HOLD until Paper~~ Publication	+	==Crystal structure of human GCN5 histone acetyltransferase domain bound with butyryl-CoA==
		+	<StructureSection load='8h65' size='340' side='right'caption='[[8h65]], [[Resolution\|resolution]] 3.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8h65]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H65 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H65 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCO:BUTYRYL+COENZYME+A'>BCO</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h65 OCA], [https://pdbe.org/8h65 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h65 RCSB], [https://www.ebi.ac.uk/pdbsum/8h65 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h65 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/KAT2A_HUMAN KAT2A_HUMAN] Functions as a histone acetyltransferase (HAT) to promote transcriptional activation. Acetylation of histones gives a specific tag for epigenetic transcription activation. Has significant histone acetyltransferase activity with core histones, but not with nucleosome core particles. Also acetylates non-histone proteins, such as CEBPB (PubMed:17301242). Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4. In case of HIV-1 infection, it is recruited by the viral protein Tat. Regulates Tat's transactivating activity and may help inducing chromatin remodeling of proviral genes.<ref>PMID:17301242</ref> <ref>PMID:19103755</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Emerging discoveries about undocumented acyltransferase activities of known histone acetyltransferases (HATs) advance our understandings in the regulation of histone modifications. However, the molecular basis of HATs selecting acyl coenzyme A (acyl-CoA) substrates for histone modification is less known. We here report that lysine acetyltransferase 2A (KAT2A) as an illustrative instance of HATs can selectively utilize acetyl-CoA, propionyl-CoA, butyryl-CoA, and succinyl-CoA to directly deposit 18 histone acylation hallmarks in nucleosome. By analyzing the co-crystal structures of the catalytic domain of KAT2A in complex with acetyl-CoA, propionyl-CoA, butyryl-CoA, malonyl-CoA, succinyl-CoA, and glutaryl-CoA, we conclude that the alternative substrate-binding pocket of KAT2A and the length and electrostatic features of the acyl chain cooperatively determine the selection of the acyl-CoA substrates by KAT2A. This study reveals the molecular basis underlying the pluripotency of HATs that selectively install acylation hallmarks in nucleosomes, which might serve as instrumental mechanism to precisely regulate histone acylation profiles in cells.

-	~~Authors~~:	+	Molecular Basis of KAT2A Selecting Acyl-CoA Cofactors for Histone Modifications.,Li S, Li N, He J, Zhou R, Lu Z, Tao YJ, Guo YR, Wang Y Research (Wash D C). 2023;6:0109. doi: 10.34133/research.0109. Epub 2023 Apr 4. PMID:37040526<ref>PMID:37040526</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 8h65" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Homo sapiens]]
		+	[[Category: Large Structures]]
		+	[[Category: Guo YR]]
		+	[[Category: Li N]]
		+	[[Category: Tao YJ]]

OCA at 05:32, 3 November 2022

OCA — Thu, 03 Nov 2022 05:32:32 GMT

←Older revision		Revision as of 05:32, 3 November 2022
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8h65 is ON HOLD	+	The entry 8h65 is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "8h65" [edit=sysop:move=sysop]

OCA — Wed, 26 Oct 2022 04:12:36 GMT

Protected "8h65" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:12, 26 October 2022

OCA: New page: '''Unreleased structure''' The entry 8h65 is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 26 Oct 2022 04:12:35 GMT

New page: '''Unreleased structure''' The entry 8h65 is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8h65 is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]