OCA at 07:07, 25 October 2023

OCA — Wed, 25 Oct 2023 07:07:46 GMT

←Older revision		Revision as of 07:07, 25 October 2023
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-	'''Unreleased structure'''

-	~~The entry~~ 8pz5 is ~~ON HOLD until Paper~~ Publication	+	==Structure of ThcOx, solved at wavelength 3.099 A==
		+	<StructureSection load='8pz5' size='340' side='right'caption='[[8pz5]], [[Resolution\|resolution]] 3.20Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8pz5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cyanothece_sp._PCC_7425 Cyanothece sp. PCC 7425]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8PZ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8PZ5 FirstGlance]. <br>
		+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8pz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8pz5 OCA], [https://pdbe.org/8pz5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8pz5 RCSB], [https://www.ebi.ac.uk/pdbsum/8pz5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8pz5 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B8HTZ1_CYAP4 B8HTZ1_CYAP4]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Despite recent advances in cryo-electron microscopy and artificial intelligence-based model predictions, a significant fraction of structure determinations by macromolecular crystallography still requires experimental phasing, usually by means of single-wavelength anomalous diffraction (SAD) techniques. Most synchrotron beamlines provide highly brilliant beams of X-rays of between 0.7 and 2 A wavelength. Use of longer wavelengths to access the absorption edges of biologically important lighter atoms such as calcium, potassium, chlorine, sulfur and phosphorus for native-SAD phasing is attractive but technically highly challenging. The long-wavelength beamline I23 at Diamond Light Source overcomes these limitations and extends the accessible wavelength range to lambda = 5.9 A. Here we report 22 macromolecular structures solved in this extended wavelength range, using anomalous scattering from a range of elements which demonstrate the routine feasibility of lighter atom phasing. We suggest that, in light of its advantages, long-wavelength crystallography is a compelling option for experimental phasing.

-	~~Authors~~:	+	Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.,El Omari K, Duman R, Mykhaylyk V, Orr CM, Latimer-Smith M, Winter G, Grama V, Qu F, Bountra K, Kwong HS, Romano M, Reis RI, Vogeley L, Vecchia L, Owen CD, Wittmann S, Renner M, Senda M, Matsugaki N, Kawano Y, Bowden TA, Moraes I, Grimes JM, Mancini EJ, Walsh MA, Guzzo CR, Owens RJ, Jones EY, Brown DG, Stuart DI, Beis K, Wagner A Commun Chem. 2023 Oct 12;6(1):219. doi: 10.1038/s42004-023-01014-0. PMID:37828292<ref>PMID:37828292</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 8pz5" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Cyanothece sp. PCC 7425]]
		+	[[Category: Large Structures]]
		+	[[Category: Duman R]]
		+	[[Category: El Omari K]]
		+	[[Category: Mykhaylyk V]]
		+	[[Category: Orr C]]
		+	[[Category: Wagner A]]

OCA at 07:23, 30 August 2023

OCA — Wed, 30 Aug 2023 07:23:44 GMT

←Older revision		Revision as of 07:23, 30 August 2023
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8pz5 is ON HOLD	+	The entry 8pz5 is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "8pz5" [edit=sysop:move=sysop]

OCA — Wed, 02 Aug 2023 09:15:10 GMT

Protected "8pz5" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:15, 2 August 2023

OCA: New page: '''Unreleased structure''' The entry 8pz5 is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 02 Aug 2023 09:15:06 GMT

New page: '''Unreleased structure''' The entry 8pz5 is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8pz5 is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]

8pz5 - Revision history

OCA at 07:07, 25 October 2023

OCA at 07:23, 30 August 2023

OCA: Protected "8pz5" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8pz5 is ON HOLD Authors: Description: Category: Unreleased Structures