OCA at 10:08, 17 January 2024

OCA — Wed, 17 Jan 2024 10:08:17 GMT

←Older revision		Revision as of 10:08, 17 January 2024
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 8qmx is ~~ON HOLD until Paper Publication~~	+	==OPR3 wildtype in complex with NADPH4==
-		+	<StructureSection load='8qmx' size='340' side='right'caption='[[8qmx]], [[Resolution\|resolution]] 1.40Å' scene=''>
-	~~Authors~~: ~~Bijelic~~, A., ~~Macheroux~~, P., ~~Kerschbaumer~~, B.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[8qmx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8QMX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8QMX FirstGlance]. <br>
-	~~Description~~: ~~OPR3 wildtype~~ in ~~complex with NADPH4~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.4Å</td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5J8:[[(2R,3S,4R,5R)-5-(5-aminocarbonyl-3,4-dihydro-2H-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]+[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methyl+hydrogen+phosphate'>5J8</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	[[Category: ~~Bijelic, A~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8qmx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8qmx OCA], [https://pdbe.org/8qmx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8qmx RCSB], [https://www.ebi.ac.uk/pdbsum/8qmx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8qmx ProSAT]</span></td></tr>
-	[[Category: ~~Macheroux, P~~]]	+	</table>
-	[[Category: Kerschbaumer, B]]	+	== Function ==
		+	[https://www.uniprot.org/uniprot/OPR3_SOLLC OPR3_SOLLC] Specifically cleaves olefinic bonds in cyclic enones. Involved in the biosynthesis of jasmonic acid (JA) and perhaps in biosynthesis or metabolism of other oxylipin signaling moleclules. It is required for the spatial and temporal regulation of JA levels during dehiscence of anthers, promoting the stomium degeneration program (By similarity). In vitro, reduces 9S,13S-12-oxophytodienoic acid (9S,13S-OPDA) and 9R,13R-OPDA to 9S,13S-OPC-8:0 and 9R,13R-OPC-8:0, respectively.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Solanum lycopersicum]]
		+	[[Category: Bijelic A]]
		+	[[Category: Kerschbaumer B]]
		+	[[Category: Macheroux P]]

OCA at 05:50, 25 October 2023

OCA — Wed, 25 Oct 2023 05:50:20 GMT

←Older revision		Revision as of 05:50, 25 October 2023
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8qmx is ON HOLD	+	The entry 8qmx is ON HOLD until Paper Publication

	Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.		Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.

OCA: Protected "8qmx" [edit=sysop:move=sysop]

OCA — Wed, 04 Oct 2023 10:51:11 GMT

Protected "8qmx" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:51, 4 October 2023

OCA: New page: '''Unreleased structure''' The entry 8qmx is ON HOLD Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B. Description: OPR3 wildtype in complex with NADPH4 [[Category: Unreleased Stru...

OCA — Wed, 04 Oct 2023 10:51:10 GMT

New page: '''Unreleased structure''' The entry 8qmx is ON HOLD Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B. Description: OPR3 wildtype in complex with NADPH4 [[Category: Unreleased Stru...

New page

'''Unreleased structure'''

The entry 8qmx is ON HOLD

Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.

Description: OPR3 wildtype in complex with NADPH4
[[Category: Unreleased Structures]]
[[Category: Bijelic, A]]
[[Category: Macheroux, P]]
[[Category: Kerschbaumer, B]]

8qmx - Revision history

OCA at 10:08, 17 January 2024

OCA at 05:50, 25 October 2023

OCA: Protected "8qmx" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8qmx is ON HOLD Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B. Description: OPR3 wildtype in complex with NADPH4 [[Category: Unreleased Stru...