OCA at 07:28, 12 July 2023

OCA — Wed, 12 Jul 2023 07:28:43 GMT

←Older revision		Revision as of 07:28, 12 July 2023
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-	'''Unreleased structure'''

-	~~The entry~~ 8st8 is ~~ON HOLD until Paper~~ Publication	+	==Structure of E3 ligase SopA bound to ubiquitin==
		+	<StructureSection load='8st8' size='340' side='right'caption='[[8st8]], [[Resolution\|resolution]] 1.75Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8st8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8ST8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8ST8 FirstGlance]. <br>
		+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.75Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AYE:PROP-2-EN-1-AMINE'>AYE</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8st8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8st8 OCA], [https://pdbe.org/8st8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8st8 RCSB], [https://www.ebi.ac.uk/pdbsum/8st8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8st8 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/SOPA_SALTY SOPA_SALTY] Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protein is an E3 ubiquitin ligase that interferes with host's ubiquitination pathway. Required for inducing polymorphonuclear leukocytes migration across the intestinal epithelium. Preferentially uses host UBE2D1 (UBCH5A), UBE2D2 (UBCH5B) and UBE2L3 (UBCH7) as E2 ubiquitin-conjugating enzymes.<ref>PMID:17076670</ref> <ref>PMID:18066077</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	HECT E3 ubiquitin (Ub) ligases direct their modified substrates toward a range of cellular fates dictated by the specific form of monomeric or polymeric Ub (polyUb) signal that is attached. How polyUb specificity is achieved has been a longstanding mystery, despite extensive study ranging from yeast to human. Two outlying examples of bacterial "HECT-like" (bHECT) E3 ligases have been reported in the human pathogens Enterohemorrhagic Escherichia coli and Salmonella Typhimurium, but what parallels can be drawn to eukaryotic HECT (eHECT) mechanism and specificity had not been explored. Here, we expanded the bHECT family and identified catalytically active, bona fide examples in both human and plant pathogens. By determining structures for three bHECT complexes in their primed, Ub-loaded states, we resolved key details of the full bHECT Ub ligation mechanism. One structure provided the first glimpse of a HECT E3 ligase in the act of ligating polyUb, yielding a means to rewire the polyUb specificity of both bHECT and eHECT ligases. Through studying this evolutionarily distinct bHECT family, we have not only gained insight into the function of key bacterial virulence factors but also revealed fundamental principles underlying HECT-type Ub ligation.

-	~~Authors~~:	+	Bacterial mimicry of eukaryotic HECT ubiquitin ligation.,Franklin TG, Brzovic PS, Pruneda JN bioRxiv. 2023 Jun 5:2023.06.05.543783. doi: 10.1101/2023.06.05.543783. Preprint. PMID:37333152<ref>PMID:37333152</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 8st8" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Homo sapiens]]
		+	[[Category: Large Structures]]
		+	[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
		+	[[Category: Franklin TG]]
		+	[[Category: Pruneda JN]]

OCA at 06:46, 14 June 2023

OCA — Wed, 14 Jun 2023 06:46:49 GMT

←Older revision		Revision as of 06:46, 14 June 2023
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8st8 is ON HOLD	+	The entry 8st8 is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "8st8" [edit=sysop:move=sysop]

OCA — Thu, 18 May 2023 06:00:43 GMT

Protected "8st8" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:00, 18 May 2023

OCA: New page: '''Unreleased structure''' The entry 8st8 is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Thu, 18 May 2023 06:00:42 GMT

New page: '''Unreleased structure''' The entry 8st8 is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8st8 is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]

8st8 - Revision history

OCA at 07:28, 12 July 2023

OCA at 06:46, 14 June 2023

OCA: Protected "8st8" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8st8 is ON HOLD Authors: Description: Category: Unreleased Structures