OCA at 08:07, 22 May 2024

OCA — Wed, 22 May 2024 08:07:26 GMT

←Older revision		Revision as of 08:07, 22 May 2024
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-	'''Unreleased structure'''

-	~~The entry~~ 8wkx is ~~ON HOLD until Paper~~ Publication	+	==Cryo-EM structure of DSR2==
		+	<StructureSection load='8wkx' size='340' side='right'caption='[[8wkx]], [[Resolution\|resolution]] 4.15Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8wkx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._natto_BEST195 Bacillus subtilis subsp. natto BEST195]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8WKX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8WKX FirstGlance]. <br>
		+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 4.15Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8wkx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8wkx OCA], [https://pdbe.org/8wkx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8wkx RCSB], [https://www.ebi.ac.uk/pdbsum/8wkx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8wkx ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/D4G637_BACNB D4G637_BACNB]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Defense-associated sirtuin 2 (DSR2) systems are widely distributed across prokaryotic genomes, providing robust protection against phage infection. DSR2 recognizes phage tail tube proteins and induces abortive infection by depleting intracellular NAD(+), a process that is counteracted by another phage-encoded protein, DSR Anti Defense 1 (DSAD1). Here, we present cryo-EM structures of Bacillus subtilis DSR2 in its apo, Tube-bound, and DSAD1-bound states. DSR2 assembles into an elongated tetramer, with four NADase catalytic modules clustered in the center and the regulatory-sensing modules distributed at four distal corners. Interestingly, monomeric Tube protein, rather than its oligomeric states, docks at each corner of the DSR2 tetramer to form a 4:4 DSR2-Tube assembly, which is essential for DSR2 NADase activity. DSAD1 competes with Tube for binding to DSR2 by occupying an overlapping region, thereby inhibiting DSR2 immunity. Thus, our results provide important insights into the assembly, activation and inhibition of the DSR2 anti-phage defense system.

-	~~Authors~~:	+	Molecular basis of bacterial DSR2 anti-phage defense and viral immune evasion.,Huang J, Zhu K, Gao Y, Ye F, Li Z, Ge Y, Liu S, Yang J, Gao A Nat Commun. 2024 May 10;15(1):3954. doi: 10.1038/s41467-024-48291-4. PMID:38729958<ref>PMID:38729958</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 8wkx" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Bacillus subtilis subsp. natto BEST195]]
		+	[[Category: Large Structures]]
		+	[[Category: Gao A]]
		+	[[Category: Huang J]]
		+	[[Category: Zhu K]]

OCA at 09:23, 29 November 2023

OCA — Wed, 29 Nov 2023 09:23:51 GMT

←Older revision		Revision as of 09:23, 29 November 2023
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8wkx is ON HOLD	+	The entry 8wkx is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "8wkx" [edit=sysop:move=sysop]

OCA — Wed, 04 Oct 2023 11:18:49 GMT

Protected "8wkx" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:18, 4 October 2023

OCA: New page: '''Unreleased structure''' The entry 8wkx is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 04 Oct 2023 11:18:48 GMT

New page: '''Unreleased structure''' The entry 8wkx is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8wkx is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]

8wkx - Revision history

OCA at 08:07, 22 May 2024

OCA at 09:23, 29 November 2023

OCA: Protected "8wkx" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8wkx is ON HOLD Authors: Description: Category: Unreleased Structures