Bam complex 3D structures - Revision history

Michal Harel at 08:33, 25 October 2022

Michal Harel — Tue, 25 Oct 2022 08:33:07 GMT

←Older revision		Revision as of 08:33, 25 October 2022
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	**[[4n75]], [[6fsu]] – EcBamA barrel domain residues 427-810<br />		**[[4n75]], [[6fsu]] – EcBamA barrel domain residues 427-810<br />
	**[[6qgw]], [[6qgx]], [[6qgy]] – EcBamA barrel domain + nanobody<br />		**[[6qgw]], [[6qgx]], [[6qgy]] – EcBamA barrel domain + nanobody<br />
-	**[[7nre]], [[7nrf]] – EcBamA barrel domain + darobactin<br />	+	**[[7nre]], [[7nrf]], [[7p1c]] – EcBamA barrel domain + darobactin<br />
	**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424<br />		**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424<br />
	**[[6t1w]] – EcBamA + RcsF<br />		**[[6t1w]] – EcBamA + RcsF<br />
		+	**[[7r1v]] – EcBamA + Dynobactin<br />
		+	**[[7ojf]] – EcBamA + sylB – Cryo EM<br />

	*BamB (Lipoprotein YFGL)		*BamB (Lipoprotein YFGL)
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	**[[2km7]] – EcBamE residues 21-114 (mutant) - NMR <br />		**[[2km7]] – EcBamE residues 21-114 (mutant) - NMR <br />
	**[[5wam]] – NgBamE<br />		**[[5wam]] – NgBamE<br />
		+	**[[7jrk]] – PaBamE<br />

	*BamA+BamB		*BamA+BamB
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	**[[5d0o]], [[5ayw]], [[6lyq]], [[6lyr]], [[6lys]] – EcBam <br />		**[[5d0o]], [[5ayw]], [[6lyq]], [[6lyr]], [[6lys]] – EcBam <br />
-	**[[5ljo]], [[6lyu]], [[6smx]], [[6sn0]], [[6sn2]], [[6sn3]], [[6sn4]], [[6sn5]], [[6sn7]], [[6sn8]], [[6sn9]], [[6so7]], [[6so8]], [[6soa]], [[6sob]], [[6soc]], [[[6sog]], [[6soh]], [[6soj]], [[6v05]], – EcBam – Cryo EM <br />	+	**[[5ljo]], [[6lyu]], [[6smx]], [[6sn0]], [[6sn2]], [[6sn3]], [[6sn4]], [[6sn5]], [[6sn7]], [[6sn8]], [[6sn9]], [[6so7]], [[6so8]], [[6soa]], [[6sob]], [[6soc]], [[[6sog]], [[6soh]], [[6soj]], [[6v05]], [[7bnq]], [[7nbx]], [[7ncs]], [[7ri4]], [[7ri5]], [[7ri6]], [[7ri7]], [[7ri8]], [[7ri9]] – EcBam – Cryo EM <br />
	**[[7nri]] – EcBam + darobactin – Cryo EM<br />		**[[7nri]] – EcBam + darobactin – Cryo EM<br />
		+	**[[7r1w]] – EcBam + dynobactin – Cryo EM<br />
		+	**[[7nd0]] – EcBam + antibody – Cryo EM<br />
		+	**[[7rj5]], [[7tsz]], [[7tt1]], [[7tt2]], [[7tt3]], [[7tt4]], [[7tt5]], [[7tt6]], [[7tt7]], [[7ttc]] – EcBam + EspP – Cryo EM<br />
	}}		}}
	[[Category:Topic Page]]		[[Category:Topic Page]]

Michal Harel at 08:22, 29 April 2021

Michal Harel — Thu, 29 Apr 2021 08:22:38 GMT

←Older revision		Revision as of 08:22, 29 April 2021
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	**[[4k3b]] – NgBamA – ''Neisseria gonorrhoeae'' <br />		**[[4k3b]] – NgBamA – ''Neisseria gonorrhoeae'' <br />
	**[[4k3c]] – BamA – ''Haemophilus ducreyi'' <br />		**[[4k3c]] – BamA – ''Haemophilus ducreyi'' <br />
-	**[[5or1]] – BamA – Salmonella typhimurium<br />	+	**[[6j09]] – HiBamA PORTA1-4 – ''Haemophilus influenzae''<br />
		+	**[[6izt]] – HiBamA PORTA3-5 <br />
		+	**[[6izs]] – HiBamA PORTA4<br />
		+	**[[5or1]] – BamA – ''Salmonella typhimurium''<br />
	**[[2qcz]], [[2qdf]] – EcBamA residues 21-351 – ''Escherichia coli'' <br />		**[[2qcz]], [[2qdf]] – EcBamA residues 21-351 – ''Escherichia coli'' <br />
	**[[3q6b]] – EcBamA POTRA1-2 domain residues 21-174<br />		**[[3q6b]] – EcBamA POTRA1-2 domain residues 21-174<br />
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	**[[4pk1]] – EcBamA/BamB <br />		**[[4pk1]] – EcBamA/BamB <br />
	**[[4n75]], [[6fsu]] – EcBamA barrel domain residues 427-810<br />		**[[4n75]], [[6fsu]] – EcBamA barrel domain residues 427-810<br />
		+	**[[6qgw]], [[6qgx]], [[6qgy]] – EcBamA barrel domain + nanobody<br />
		+	**[[7nre]], [[7nrf]] – EcBamA barrel domain + darobactin<br />
	**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424<br />		**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424<br />
		+	**[[6t1w]] – EcBamA + RcsF<br />

	*BamB (Lipoprotein YFGL)		*BamB (Lipoprotein YFGL)
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	*BamA+BamB+BamC+BamD+BamE		*BamA+BamB+BamC+BamD+BamE

-	**[[5d0o]], [[5ayw]] – EcBam <br />	+	**[[5d0o]], [[5ayw]], [[6lyq]], [[6lyr]], [[6lys]] – EcBam <br />
-	**[[5ljo]], [[6v05]] – EcBam – Cryo EM <br />	+	**[[5ljo]], [[6lyu]], [[6smx]], [[6sn0]], [[6sn2]], [[6sn3]], [[6sn4]], [[6sn5]], [[6sn7]], [[6sn8]], [[6sn9]], [[6so7]], [[6so8]], [[6soa]], [[6sob]], [[6soc]], [[[6sog]], [[6soh]], [[6soj]], [[6v05]], – EcBam – Cryo EM <br />
-		+	**[[7nri]] – EcBam + darobactin – Cryo EM<br />
	}}		}}
	[[Category:Topic Page]]		[[Category:Topic Page]]

Michal Harel at 09:27, 15 June 2020

Michal Harel — Mon, 15 Jun 2020 09:27:32 GMT

←Older revision		Revision as of 09:27, 15 June 2020
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	**[[2yhc]], [[3q5m]] – EcBamD residues 29-245 <br />		**[[2yhc]], [[3q5m]] – EcBamD residues 29-245 <br />
-	**[[3qky]] – RmBamD residues 24-280 – ''Rhodothermus marinus''<br />
	**[[3tgo]] – EcBamD residues 21-245 + lipoprotein 34<br />		**[[3tgo]] – EcBamD residues 21-245 + lipoprotein 34<br />
	**[[5waq]] – NgBamD<br />		**[[5waq]] – NgBamD<br />
		+	**[[3qky]] – RmBamD residues 24-280 – ''Rhodothermus marinus''<br />

	*BamE (Small protein A)		*BamE (Small protein A)
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	**[[5d0o]], [[5ayw]] – EcBam <br />		**[[5d0o]], [[5ayw]] – EcBam <br />
-	**[[5ljo]] – EcBam – Cryo EM <br />	+	**[[5ljo]], [[6v05]] – EcBam – Cryo EM <br />

	}}		}}
	[[Category:Topic Page]]		[[Category:Topic Page]]

Michal Harel at 09:18, 15 June 2020

Michal Harel — Mon, 15 Jun 2020 09:18:10 GMT

←Older revision		Revision as of 09:18, 15 June 2020
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	}}		}}
		+	[[Category:Topic Page]]

Michal Harel: New page: == 3D Structures of Bam complex == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *BamA (Omp85) **4k3b – Ng...

Michal Harel — Mon, 01 Apr 2019 10:30:46 GMT

New page: == 3D Structures of Bam complex == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *BamA (Omp85) **4k3b – Ng...

New page

== 3D Structures of Bam complex ==

Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|

*BamA (Omp85)

**[[4k3b]] – NgBamA – ''Neisseria gonorrhoeae'' 
**[[4k3c]] – BamA – ''Haemophilus ducreyi'' 
**[[5or1]] – BamA – Salmonella typhimurium 
**[[2qcz]], [[2qdf]] – EcBamA residues 21-351 – ''Escherichia coli'' 
**[[3q6b]] – EcBamA POTRA1-2 domain residues 21-174 
**[[3efc]] – EcBamA periplasmic domain residues 21-410 
**[[4c4v]] – EcBamA residues 344-808 
**[[4pk1]] – EcBamA/BamB 
**[[4n75]], [[6fsu]] – EcBamA barrel domain residues 427-810 
**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424 

*BamB (Lipoprotein YFGL)

**[[3q7m]], [[3q7n]], [[3q7o]], [[3p1l]], [[2yms]] – EcBamB 
**[[3q54]], [[3prw]], [[2yh3]] – EcBamB residues 25-392 
**[[4hdj]] – BamB residues 20-380 – ''Pseudomonas aeruginosa'' 
**[[4imm]] – BamB – ''Moraxella catarrhalis'' 

*BamC (Lipoprotein 34)

**[[2yh5]], [[3sns]] – EcBamC C terminal 
**[[2lae]] – EcBamC C terminal - NMR 
**[[2yh6]] – EcBamC N terminal 
**[[2laf]] – EcBamC N terminal - NMR 

*BamD (Lipoprotein YFIO)

**[[2yhc]], [[3q5m]] – EcBamD residues 29-245 
**[[3qky]] – RmBamD residues 24-280 – ''Rhodothermus marinus'' 
**[[3tgo]] – EcBamD residues 21-245 + lipoprotein 34 
**[[5waq]] – NgBamD 

*BamE (Small protein A)

**[[2yh9]] – EcBamE residues 34-113 
**[[2kxx]] – EcBamE residues 21-114 - NMR 
**[[2km7]] – EcBamE residues 21-114 (mutant) - NMR 
**[[5wam]] – NgBamE 

*BamA+BamB

**[[4xga]] – EcBam 

*BamA+BamD

**[[5efr]] – RmBam 

*BamA+BamC+BamD+BamE

**[[5ekq]], [[5d0q]] – EcBam 

*BamA+BamB+BamC+BamD+BamE

**[[5d0o]], [[5ayw]] – EcBam 
**[[5ljo]] – EcBam – Cryo EM 

}}