Multi-protein assemblies - Revision history

Wayne Decatur: /* External Resources */

Wayne Decatur — Wed, 19 Oct 2011 13:31:05 GMT

External Resources

←Older revision		Revision as of 13:31, 19 October 2011
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	* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].		* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].
	* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes. In particular, the authors are working to implement logical and consistent representation of protein complexes.		* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes. In particular, the authors are working to implement logical and consistent representation of protein complexes.
-	*[https://www.molnac.unisa.it/BioTools/cocomaps/ COCOMAPS (bioCOmplexes COntact MAPS)] is a web server for analysis and visualization of the interfaces present in biological complexes, such as protein-protein, protein-DNA and protein-RNA complexes, making use of intermolecular contact maps.	+	*[https://www.molnac.unisa.it/BioTools/cocomaps/ COCOMAPS (bioCOmplexes COntact MAPS)] is a web server for analysis and visualization of the interfaces present in biological complexes, such as protein-protein, protein-DNA and protein-RNA complexes, making use of intermolecular contact maps.
		+	* [http://haddock.chem.uu.nl/ The HADDOCK web server] is web server for data-driven biomolecular docking for modeling of biomolecular complexes.

	==Literature Citations==		==Literature Citations==
	Literature citations can also be found at the respective servers linked above.		Literature citations can also be found at the respective servers linked above.

Wayne Decatur at 13:51, 10 October 2011

Wayne Decatur — Mon, 10 Oct 2011 13:51:26 GMT

←Older revision		Revision as of 13:51, 10 October 2011
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	* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].		* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].
	* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes. In particular, the authors are working to implement logical and consistent representation of protein complexes.		* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes. In particular, the authors are working to implement logical and consistent representation of protein complexes.
		+	*[https://www.molnac.unisa.it/BioTools/cocomaps/ COCOMAPS (bioCOmplexes COntact MAPS)] is a web server for analysis and visualization of the interfaces present in biological complexes, such as protein-protein, protein-DNA and protein-RNA complexes, making use of intermolecular contact maps.

	==Literature Citations==		==Literature Citations==
	Literature citations can also be found at the respective servers linked above.		Literature citations can also be found at the respective servers linked above.

Wayne Decatur at 02:40, 23 September 2011

Wayne Decatur — Fri, 23 Sep 2011 02:40:08 GMT

←Older revision		Revision as of 02:40, 23 September 2011
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-	==~~Web Sites~~==	+	==External Resources==
	* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].		* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].
	* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes. In particular, the authors are working to implement logical and consistent representation of protein complexes.		* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes. In particular, the authors are working to implement logical and consistent representation of protein complexes.

Wayne Decatur: /* Web Sites */

Wayne Decatur — Fri, 23 Sep 2011 02:39:45 GMT

Web Sites

←Older revision		Revision as of 02:39, 23 September 2011
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	==Web Sites==		==Web Sites==
	* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].		* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].
-	* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes ~~and is~~ working to implement logical and consistent representation of protein complexes.	+	* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes. In particular, the authors are working to implement logical and consistent representation of protein complexes.

	==Literature Citations==		==Literature Citations==
	Literature citations can also be found at the respective servers linked above.		Literature citations can also be found at the respective servers linked above.

Wayne Decatur at 12:22, 22 September 2011

Wayne Decatur — Thu, 22 Sep 2011 12:22:37 GMT

←Older revision		Revision as of 12:22, 22 September 2011
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	==See Also==		==See Also==
	* [[Complexes]]		* [[Complexes]]
-	* [[Complexes\|Assemblies]	+	* [[Complexes\|Assemblies]]
		+	* [[Biological assembly\|Biological unit]]
	* [[Biological assembly]]		* [[Biological assembly]]
	* [[Crystal contacts]]		* [[Crystal contacts]]

Wayne Decatur at 12:21, 22 September 2011

Wayne Decatur — Thu, 22 Sep 2011 12:21:56 GMT

←Older revision		Revision as of 12:21, 22 September 2011
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	Many [[PDB file\|PDB files]] contain [[Complexes\|complexes]] in which a particular protein is interacting with a different protein in what are called [[Multi-protein assemblies\|multi-protein assemblies]] or [[Multi-protein assemblies\|multi-protein complexes]]. These interactions, if biologically relevant, can be immensely insightful in shedding light on cellular and extracellular processes.		Many [[PDB file\|PDB files]] contain [[Complexes\|complexes]] in which a particular protein is interacting with a different protein in what are called [[Multi-protein assemblies\|multi-protein assemblies]] or [[Multi-protein assemblies\|multi-protein complexes]]. These interactions, if biologically relevant, can be immensely insightful in shedding light on cellular and extracellular processes.

-	~~==See Also==~~	+
-	* [[Crystal contacts]]	+
-	* [[X-ray crystallography]]	+
-	* [[Biological assembly]]	+
-	* [[Ligand]]	+
	==Examples==		==Examples==
	* [[Ribosome]]		* [[Ribosome]]
	* [[Human Follicle-Stimulating Hormone Complexed with its Receptor]]		* [[Human Follicle-Stimulating Hormone Complexed with its Receptor]]
	* [[Platelet-receptor glycoprotein Ib alpha\|Platelet-receptor glycoprotein Ib alpha bound to the von Willebrand Factor A1 Domain]]		* [[Platelet-receptor glycoprotein Ib alpha\|Platelet-receptor glycoprotein Ib alpha bound to the von Willebrand Factor A1 Domain]]
		+
		+
		+	==See Also==
		+	* [[Complexes]]
		+	* [[Complexes\|Assemblies]
		+	* [[Biological assembly]]
		+	* [[Crystal contacts]]
		+	* [[X-ray crystallography]]
		+	* [[Ligand]]
		+

	==Web Sites==		==Web Sites==
-	*[http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].	+	* [http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].
		+	* [http://pir.georgetown.edu/pro/ PRO] provides an ontological representation of proteins in complexes and is working to implement logical and consistent representation of protein complexes.

	==Literature Citations==		==Literature Citations==
-		+	Literature citations can also be found at the respective servers linked above.
-	Literature citations ~~will~~ be found at the respective servers linked above.	+

Wayne Decatur at 16:02, 1 August 2011

Wayne Decatur — Mon, 01 Aug 2011 16:02:58 GMT

←Older revision		Revision as of 16:02, 1 August 2011
Line 2:		Line 2:

	==See Also==		==See Also==
-	*[[Crystal contacts]]	+	* [[Crystal contacts]]
-	*[[X-ray crystallography]]	+	* [[X-ray crystallography]]
-	*[[Biological assembly]]	+	* [[Biological assembly]]
-		+	* [[Ligand]]
	==Examples==		==Examples==
	* [[Ribosome]]		* [[Ribosome]]

Wayne Decatur at 16:00, 1 August 2011

Wayne Decatur — Mon, 01 Aug 2011 16:00:25 GMT

←Older revision		Revision as of 16:00, 1 August 2011
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-	Many [[PDB file\|PDB files]] contain complexes in which ~~more than one~~ protein is interacting with ~~another~~ in what are called [[Multi-protein assemblies\|multi-protein assemblies]] or [[Multi-protein assemblies\|multi-protein complexes]]. These interactions, if biologically relevant, can be immensely insightful in shedding light on cellular and extracellular processes.	+	Many [[PDB file\|PDB files]] contain [[Complexes\|complexes]] in which a particular protein is interacting with a different protein in what are called [[Multi-protein assemblies\|multi-protein assemblies]] or [[Multi-protein assemblies\|multi-protein complexes]]. These interactions, if biologically relevant, can be immensely insightful in shedding light on cellular and extracellular processes.

	==See Also==		==See Also==
Line 5:		Line 5:
	*[[X-ray crystallography]]		*[[X-ray crystallography]]
	*[[Biological assembly]]		*[[Biological assembly]]
		+
		+	==Examples==
		+	* [[Ribosome]]
		+	* [[Human Follicle-Stimulating Hormone Complexed with its Receptor]]
		+	* [[Platelet-receptor glycoprotein Ib alpha\|Platelet-receptor glycoprotein Ib alpha bound to the von Willebrand Factor A1 Domain]]

	==Web Sites==		==Web Sites==

Wayne Decatur at 15:52, 1 August 2011

Wayne Decatur — Mon, 01 Aug 2011 15:52:07 GMT

←Older revision		Revision as of 15:52, 1 August 2011
Line 1:		Line 1:
-	Many [[PDB file\|PDB files]] contain complexes in which more than one protein is interacting with another in what are called [[Multi-protein assemblies\|multi-protein assemblies]] or [[Multi-protein assemblies\|~~Multi~~-protein complexes]]. These interactions, if biologically relevant, can be immensely insightful in shedding light on cellular and extracellular processes.	+	Many [[PDB file\|PDB files]] contain complexes in which more than one protein is interacting with another in what are called [[Multi-protein assemblies\|multi-protein assemblies]] or [[Multi-protein assemblies\|multi-protein complexes]]. These interactions, if biologically relevant, can be immensely insightful in shedding light on cellular and extracellular processes.

	==See Also==		==See Also==

Wayne Decatur: New page: Many PDB files contain complexes in which more than one protein is interacting with another in what are called multi-protein assemblies or [[Multi...

Wayne Decatur — Mon, 01 Aug 2011 15:50:36 GMT

New page: Many PDB files contain complexes in which more than one protein is interacting with another in what are called multi-protein assemblies or [[Multi...

New page

Many [[PDB file|PDB files]] contain complexes in which more than one protein is interacting with another in what are called [[Multi-protein assemblies|multi-protein assemblies]] or [[Multi-protein assemblies|Multi-protein complexes]]. These interactions, if biologically relevant, can be immensely insightful in shedding light on cellular and extracellular processes.

==See Also==
*[[Crystal contacts]]
*[[X-ray crystallography]]
*[[Biological assembly]]

==Web Sites==
*[http://www-cryst.bioc.cam.ac.uk/~richard/piccolo/about.php PICCOLO, a comprehensive relational database featuring the details of structurally characterized protein-protein interactions].

==Literature Citations==

Literature citations will be found at the respective servers linked above.