Nitrate reductase - Revision history

Alexander Berchansky at 13:48, 23 July 2019

Alexander Berchansky — Tue, 23 Jul 2019 13:48:27 GMT

←Older revision		Revision as of 13:48, 23 July 2019
Line 10:		Line 10:

	== Structural highlights ==		== Structural highlights ==
-	<scene name='49/490062/Cv/2'>Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and 2 molybdepterin guanine nucleotides</scene>. NAP active site includes a <scene name='49/490062/Cv/4'>six-coordinated Mo atom which coordinates to 2 MGD molecules and Cys140</scene>. The <scene name='49/490062/Cv/6'>NO3 molecule is guided to the active site by a funnel leading to the Mo atom</scene><ref>PMID:18327621</ref>.	+	<scene name='49/490062/Cv/7'>Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and 2 molybdepterin guanine nucleotides</scene>. NAP active site includes a <scene name='49/490062/Cv/8'>six-coordinated Mo atom which coordinates to 2 MGD molecules and Cys140</scene>. The <scene name='49/490062/Cv/9'>NO3 molecule is guided to the active site by a funnel leading to the Mo atom</scene><ref>PMID:18327621</ref>.

	</StructureSection>		</StructureSection>

Michal Harel at 08:27, 14 August 2018

Michal Harel — Tue, 14 Aug 2018 08:27:47 GMT

←Older revision		Revision as of 08:27, 14 August 2018
Line 27:		Line 27:
	**[[1ogy]] - NAP + heme + MGD + Mo– ''Rhodobacter sphaeroides''<br />		**[[1ogy]] - NAP + heme + MGD + Mo– ''Rhodobacter sphaeroides''<br />
	**[[2nya]] - EcNAP + MGD + Mo – ''Escherichia coli''<br />		**[[2nya]] - EcNAP + MGD + Mo – ''Escherichia coli''<br />
-	**[[3ml1]], [[3o5a]] - NAP catalytic subunit + NAPB + heme + MGD + Mo – ''Ralstonia eutropha''	+	**[[3ml1]], [[3o5a]] - NAP catalytic subunit + NAPB + heme + MGD + Mo – ''Ralstonia eutropha''<br />
		+	**[[5yly]] – NR cytochrome b5 reductase domain + FAD – ''Ulva prolifera''<br />

	*Bacterial respiratory NR		*Bacterial respiratory NR

Michal Harel at 08:22, 14 August 2018

Michal Harel — Tue, 14 Aug 2018 08:22:32 GMT

←Older revision		Revision as of 08:22, 14 August 2018
Line 1:		Line 1:
-	<StructureSection load='' size='~~450~~' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3- and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/3'>	+	<StructureSection load='' size='350' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3- and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/3'>

	== Function ==		== Function ==

Michal Harel at 18:14, 20 October 2017

Michal Harel — Fri, 20 Oct 2017 18:14:29 GMT

←Older revision		Revision as of 18:14, 20 October 2017
Line 1:		Line 1:
-	<StructureSection load='' size='450' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/3'>	+	<StructureSection load='' size='450' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3- and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/3'>

	== Function ==		== Function ==

Joel L. Sussman at 09:02, 23 August 2017

Joel L. Sussman — Wed, 23 Aug 2017 09:02:52 GMT

←Older revision		Revision as of 09:02, 23 August 2017
Line 1:		Line 1:
-	<StructureSection load='~~2jiq~~' size='450' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/3'>	+	<StructureSection load='' size='450' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/3'>

	== Function ==		== Function ==

Michal Harel at 06:18, 23 August 2017

Michal Harel — Wed, 23 Aug 2017 06:18:56 GMT

←Older revision		Revision as of 06:18, 23 August 2017
Line 42:		Line 42:

	**[[2bih]], [[2bii]] – NR MoCo-binding domain + MPT – ''Pichia angusta''		**[[2bih]], [[2bii]] – NR MoCo-binding domain + MPT – ''Pichia angusta''
		+
		+	*Eukaryotic NR
		+
		+	**[[1cne]] – cNR + FAD – corn<br />
		+	**[[1cnf]], [[2cnd]] – cNR (mutant) + FAD + ADP<br />
		+
	}}		}}
	== References ==		== References ==
	<references/>		<references/>
	[[Category:Topic Page]]		[[Category:Topic Page]]

Alexander Berchansky at 09:06, 31 May 2016

Alexander Berchansky — Tue, 31 May 2016 09:06:15 GMT

←Older revision		Revision as of 09:06, 31 May 2016
Line 10:		Line 10:

	== Structural highlights ==		== Structural highlights ==
-	<scene name='49/490062/Cv/2'>Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and 2 molybdepterin guanine nucleotides</scene>. NAP active site includes a <scene name='49/490062/Cv/4'>six-coordinated Mo atom which coordinates to 2 MGD molecules and Cys140</scene>. The ~~planery~~ NO3 molecule is guided to the active site by a funnel leading to the Mo atom<ref>PMID:18327621</ref>.	+	<scene name='49/490062/Cv/2'>Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and 2 molybdepterin guanine nucleotides</scene>. NAP active site includes a <scene name='49/490062/Cv/4'>six-coordinated Mo atom which coordinates to 2 MGD molecules and Cys140</scene>. The <scene name='49/490062/Cv/6'>NO3 molecule is guided to the active site by a funnel leading to the Mo atom</scene><ref>PMID:18327621</ref>.

	</StructureSection>		</StructureSection>

Alexander Berchansky at 09:01, 31 May 2016

Alexander Berchansky — Tue, 31 May 2016 09:01:59 GMT

←Older revision		Revision as of 09:01, 31 May 2016
Line 10:		Line 10:

	== Structural highlights ==		== Structural highlights ==
-	<scene name='49/490062/Cv/2'>Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and 2 molybdepterin guanine nucleotides</scene>. NAP active site includes a six-coordinated Mo atom which coordinates to ~~3 amino acids and~~ 2 MGD molecules. The planery NO3 molecule is guided to the active site by a funnel leading to the Mo atom<ref>PMID:18327621</ref>.	+	<scene name='49/490062/Cv/2'>Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and 2 molybdepterin guanine nucleotides</scene>. NAP active site includes a <scene name='49/490062/Cv/4'>six-coordinated Mo atom which coordinates to 2 MGD molecules and Cys140</scene>. The planery NO3 molecule is guided to the active site by a funnel leading to the Mo atom<ref>PMID:18327621</ref>.

	</StructureSection>		</StructureSection>

Alexander Berchansky at 08:42, 31 May 2016

Alexander Berchansky — Tue, 31 May 2016 08:42:21 GMT

←Older revision		Revision as of 08:42, 31 May 2016
Line 1:		Line 1:
-	<StructureSection load='2jiq' size='450' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo ~~(green)~~, NO3 and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/1'>	+	<StructureSection load='2jiq' size='450' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/3'>

	== Function ==		== Function ==
Line 10:		Line 10:

	== Structural highlights ==		== Structural highlights ==
-	NAP active site includes a six-coordinated Mo atom which coordinates to 3 amino acids and 2 MGD molecules. The planery ~~NO<sub>3</sub>~~ molecule is guided to the active site by a funnel leading to the Mo atom<ref>PMID:18327621</ref>.	+	<scene name='49/490062/Cv/2'>Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo, NO3 and 2 molybdepterin guanine nucleotides</scene>. NAP active site includes a six-coordinated Mo atom which coordinates to 3 amino acids and 2 MGD molecules. The planery NO3 molecule is guided to the active site by a funnel leading to the Mo atom<ref>PMID:18327621</ref>.

	</StructureSection>		</StructureSection>

Alexander Berchansky at 08:29, 31 May 2016

Alexander Berchansky — Tue, 31 May 2016 08:29:33 GMT

←Older revision		Revision as of 08:29, 31 May 2016
Line 1:		Line 1:
-	<StructureSection load='2jiq' size='~~350~~' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo (green), NO3 and molybdepterin guanine nucleotide ~~(stick model)~~ (PDB entry [[2jiq]])' scene=''>	+	<StructureSection load='2jiq' size='450' side='right' caption='Bacterial periplasmic dissimilatory nitrate reductase containing Fe4S4 cluster with Mo (green), NO3 and molybdepterin guanine nucleotide (PDB entry [[2jiq]])' scene='49/490062/Cv/1'>

	== Function ==		== Function ==